Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1172 ATGGAGCCGAACATTCCCAGAGGAGCTGAAGAACAGAGCACGGCATATCTCATGGAAGATAGTGATTTTTCAGAAACTGCTAAGTTCATAAGCCAGATCCTCATGGAAGAAAACATTGACCAGAGGCCACTCTATGACACACTTACCTTGCAAGTTACAGAGAAGTCCTTCTACGACGCTCTCACTGGCAACATACCTCTTTCCCCCAACCCCAATCAACACCCCCTTCTTCTCAGTCCCCAAGCTCAAACCACCATCACCGAACATGGACTCTCAGATTTGGATTCTTCCTTGCAACAGAACCTGTTCAATGATGCTGATTCGGTTTCCCACTTTAAGAGAGGGTTAGAGGAAGCTACCAAGTTTCTTCCTCCGGTGTCTAACCTTGTAACTGGTCAATATCCAAACGGGGAACAACCAATCAATACGTTTGAAGGGAATTCCTATGGATTTCAGAGTAGGAAGAATCACGAGCGTGAAGAGATAGACACCAGAGAAGAAGAGCATGAAGGGAGAGGTCACAAGCAATCAGCACTTAGTCTTGTTGATGAGACTGACTTGTCAGATGCTATTGATCGGGTGTTTCTAAGTGTGGAAAACGTGTGTATTGAACACAGTTCTTTGCAGAATGGAGCACTGAAACCTAAGGCACCAGAGGTAGGGAAGGGTCGTTCAAAGAAACAAGGAAGGAAGAAGGAAACAGTGGATTTGAGAAATCTTCTGTTGATGTGTTCACAATCTGTGTATGCCAATGACATCAGGACTGCCAATGAATTGCTAAAGCAGATTAGGCAACACTCTTCTCCCGTTGGGGATGCATCACAGAGGTTGGCTCATTACTTCGCCAATGGCCTCGAGGCACGCTTGATTGGGGCTGGTTCAGGTGCAATAGGAACATTTTCTTTTGTGAGTTCTAAGAGGATCACTGCTGCAGAGTTCCTGAAGGCATACCAAGTTTTTCTATCTGCCACCCCTTTCAAGAAGTTTACATATTTCTTTGCAAATCAAATGATTGTGAAAGCAGCCGCAAAGGCAGAAATCATCCATATTATTGATTATGGCATCCTATATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTATCAAATAGAGAGGGGGGTCCTCCCAAGCTGAGGATCACAGGAATAGAGTTTCCCCAATCTGGCTTCCGCCCCACAGAAAGAATTGAGGAGACTGGTCACCGGCTGGCTAACTATTGCAAGCGTTACAATGTTCCCTTTGAATATCATGCTATAGCATCACGGAACTGGGAAACCATTAAGCTTGAAGCCCTTAAAATTGAGAGAAATGAGCTAGTTGCTGTAAACTGTCACATGAGATTTGAACATCTACTGGATGAGAGTACTATTGAAGTGAACAGTCCCAGAAATGCTTTCCTGCATCTGATCAGGAAGATAAATCCGGATATTTTTACTCAGATCATTATTAATGGATCATATGATGCCCCTTTCTTTGCCACACGGTTTAGGGAGGCACTCTTCCATTATTCTGCTATTTATGACATGTTTGACACTGTCATAACTAGTGAAAATGAATGGAGGATGACGATTGAGAGTGAGCTTTTGGGCCGGGAGGTTATGAATGTTATAGCATGTGAAGGTTCTGAGAGGGTTCAGAGACCTGAGACATACAAACAATGGCAGGTTAGGAATACGAGGGCTGGTTTCAAGCAGCTCCCACTGAATGAGGAATTAATGGCTAAATTCAGGAGTAAGTTAAAGGAATACCACAGAGATTTTGTCTTAGATGAAAATAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTTAATGCTTCCACTTGTTGGTTTCCGGCATAA 1845 0.4358 MEPNIPRGAEEQSTAYLMEDSDFSETAKFISQILMEENIDQRPLYDTLTLQVTEKSFYDALTGNIPLSPNPNQHPLLLSPQAQTTITEHGLSDLDSSLQQNLFNDADSVSHFKRGLEEATKFLPPVSNLVTGQYPNGEQPINTFEGNSYGFQSRKNHEREEIDTREEEHEGRGHKQSALSLVDETDLSDAIDRVFLSVENVCIEHSSLQNGALKPKAPEVGKGRSKKQGRKKETVDLRNLLLMCSQSVYANDIRTANELLKQIRQHSSPVGDASQRLAHYFANGLEARLIGAGSGAIGTFSFVSSKRITAAEFLKAYQVFLSATPFKKFTYFFANQMIVKAAAKAEIIHIIDYGILYGFQWPILIKFLSNREGGPPKLRITGIEFPQSGFRPTERIEETGHRLANYCKRYNVPFEYHAIASRNWETIKLEALKIERNELVAVNCHMRFEHLLDESTIEVNSPRNAFLHLIRKINPDIFTQIIINGSYDAPFFATRFREALFHYSAIYDMFDTVITSENEWRMTIESELLGREVMNVIACEGSERVQRPETYKQWQVRNTRAGFKQLPLNEELMAKFRSKLKEYHRDFVLDENNNWMLQGWKGRIFNASTCWFPA* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1172 614 MobiDBLite consensus disorder prediction 137 178 - -
Gso11g1172 614 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 14 70 - -
Gso11g1172 614 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 101 613 - -
Gso11g1172 614 MobiDBLite consensus disorder prediction 137 151 - -
Gso11g1172 614 Pfam GRAS domain family 237 611 IPR005202 -
Gso11g1172 614 ProSiteProfiles GRAS family profile. 228 612 IPR005202 -
Gso11g1172 614 MobiDBLite consensus disorder prediction 212 232 - -
Gso11g1172 614 MobiDBLite consensus disorder prediction 152 178 - -
Gso11g1172 614 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 70 IPR005202 -
Gso11g1172 614 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 101 613 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1172 Gso-Chr11 10526574 10534034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1172 98 614 GRAS Transcription Factor Family AT1G07520 53.244 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso11g1172 GRAS 5.3e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1172 - - gmx:100794790 1202.96