Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1171 ATGCTCTCCACGGATTCCCTTTTGGAAAATTTCCCTTTTGTAAACGGTCCTATCTCGGTGTTTTCGAATCAGAATCCGGAAAGTGGGTTCAAGGTGGATGATTCATGTTCCCCTTCAGAATCTGTCACTGATTCTGGTCCTTCTTCTGGGACAAGCTCGAATGGAGAACATGCAGAGAGTACTAAGCACTCCAATCCCATTCTCAGATACATTAGTGACATCCTCATGGATGAAGAAGTTGATTTGGAGCGAAAACCCTGCATGTTGCAGGATTGTTTGAGACTTCAGGCTGCTGAAAAATCATTCTATGATGCATTGGTTCGTAGTTACCCTTCATCAACTGGTCAATTTAATGATAATCCTGACCCAGATGATAATTTTGGTGGAACTACTAGTTCTGAGAGTTTTAGCAGTTATACCACTGATAATTCATGCGAGTCTGATTGGTTTAACGGTGCTAGTGACTTGGATTCCTCTTTCCTACAAAGATCTCTAATTGATTCTCTGGAACACACATATGTAGCTCCTGATCTGTTTAGAGAGACACAAGCTGGGGTCCATTTTTCAAATGGAGCCTGGAATTTGATTCACTTGCAGAACAAGCCACGTGCTATTGAGGATGGTGTGATGCGGGGTTCTGTAACAGCCACAGGATTGAGGGAGAAGAGGAGCTATCAAATGAATGATATCTCACATGAAGAAGAGGAGAAAAGCAACAAGCTTTCAGCTGTCTACTTGGATGATTCGGAGCCATCTAGCATGTTTGATGATGTGCTGCTGTGTAAGGATGGTAAGAGTCCATCTATTTTTTATGCTGGCCGTGAACCGTCACCATCGCAGATTGCTGACTCAGGAGGATCTAATGGGAAGAAAACACGATCGAAGAAAGGTTCCAACAAGAGGACAAGTGCAAGCGCAACGGTGGATTTATGGACTTTGCTAACTCAATGTGCACAGGCTGTGGCTAGCTTTGACCAAAGGACTGCAAATGAAACACTCAAGCAGATTAGGCAGCACTCTTCACCTTATGGCGATGGACTTCAGCGTTTGGCTCATTACTTTGCCGATGGCCTTGAGAAACGGTTAGCTGCTGGGACACCAAAGTTCATTTCCTTTCAATCAGCATCTGCCGCAGATATGTTGAAAGCCTACAGAGTGTATATCTCAGCATCACCATTTCTCAGGATGTCAAATTTCTTGGCTAACAGCACTATTCTGAAGCTAGCACAAAATGAAAGCAGTATTCACATTATTGACTTTGGGATTAGCTATGGTTTCCAGTGGCCTTGCCTCATCCAACGGCTTTCAGAGAGGCCGGGCGGGCCTCCAAAGCTTCGTATGATGGGAATTGATCTTCCCCAGCCGGGATTTAGGCCGGCGGAAAGGGTTGAGGAGACAGGGCGGTGGCTGGAGAAGTACTGCAAGAGGTTTGGAGTCCCATTTGAGTACAATTGCCTTGCACAAAAATGGGAAACTATAAGACTTGAAGACCTCAAAATTGATAGGAGTGAAGTAACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTATCCGATGAAACCGTGACTGCCAACTGTCCAAGAGATGCTTTGCTGAGGTTGATCAGGAGGATCAATCCAAACATCTTCATGCACGGGATCGTCAACGGCACTTACAATGCACCGTTTTTCGTGACAAGGTTCAGGGAAGCACTCTTCCACTTCTCATCATTGTTTGACATGTTTGAAGCCAATGTGCCTCGTGAAGATCCATCTAGGCTTATGATTGAGAAAGGGTTGTTTGGAAGGGATGCAATCAATGTGATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAAACCTACAAGCAGTGGCAAGTCAGGAACCAGAGAGCAGGGTTCAAGCAACTTCCATTGGCCCAAGAGCATGTGAATAGAGTGAAGGAAATGGTGAAGAAGGAATACCATAAAGATTTTGTAGTTGGTGAGGATGGCAAGTGGGTTTTGCAAGGATGGAAAGGGCGAATTCTTTTTGCTGTTTCTTCTTGGACTCCTGCTTGA 2043 0.4493 MLSTDSLLENFPFVNGPISVFSNQNPESGFKVDDSCSPSESVTDSGPSSGTSSNGEHAESTKHSNPILRYISDILMDEEVDLERKPCMLQDCLRLQAAEKSFYDALVRSYPSSTGQFNDNPDPDDNFGGTTSSESFSSYTTDNSCESDWFNGASDLDSSFLQRSLIDSLEHTYVAPDLFRETQAGVHFSNGAWNLIHLQNKPRAIEDGVMRGSVTATGLREKRSYQMNDISHEEEEKSNKLSAVYLDDSEPSSMFDDVLLCKDGKSPSIFYAGREPSPSQIADSGGSNGKKTRSKKGSNKRTSASATVDLWTLLTQCAQAVASFDQRTANETLKQIRQHSSPYGDGLQRLAHYFADGLEKRLAAGTPKFISFQSASAADMLKAYRVYISASPFLRMSNFLANSTILKLAQNESSIHIIDFGISYGFQWPCLIQRLSERPGGPPKLRMMGIDLPQPGFRPAERVEETGRWLEKYCKRFGVPFEYNCLAQKWETIRLEDLKIDRSEVTVVNCLYRLKNLSDETVTANCPRDALLRLIRRINPNIFMHGIVNGTYNAPFFVTRFREALFHFSSLFDMFEANVPREDPSRLMIEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRAGFKQLPLAQEHVNRVKEMVKKEYHKDFVVGEDGKWVLQGWKGRILFAVSSWTPA* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1171 680 MobiDBLite consensus disorder prediction 29 63 - -
Gso11g1171 680 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 679 IPR005202 -
Gso11g1171 680 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 679 - -
Gso11g1171 680 MobiDBLite consensus disorder prediction 113 139 - -
Gso11g1171 680 Pfam GRAS domain family 312 678 IPR005202 -
Gso11g1171 680 MobiDBLite consensus disorder prediction 271 301 - -
Gso11g1171 680 ProSiteProfiles GRAS family profile. 301 678 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1171 Gso-Chr11 10512482 10515527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1171 64 679 GRAS Transcription Factor Family AT2G29060 46.486 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso11g1171 GRAS 8.1e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1171 - - gmx:100793210 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1171 11 10512482 10515527 Gso11g1171 11 10512482 10515527 ECH
Gso12g0510 12 4556999 4559780 Gso11g1171 11 10512482 10515527 GST