Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1162 ATGGATACTTTTATGATCAGAGTGGGACCCAAAGGTGATCTTTACAAGGAATTGCAAAAATGCAAATATTTCAGTGAAAGACGTGTAACTACTTATGTTGCATCATTGGCCCGAGCCTTTATATATTGCCATGGAAAGCATGTAATACATAGGGATATTAAACCAGAGAACCTTCTTATTGGTTCACAGATACAAGAGATTTATAGAGCTTATGGTTACTTTTTGAAGAAGGATTATGTGATAAAGGAGAAACATTTGCGGCCACAACAACGAATGCAATGGCGACAACAGATCCAGAGGTGGAGACTCTGCAAAGGTGGGCGTGGCTGTTGGGGCCAAGATTGGTAG 348 0.4052 MDTFMIRVGPKGDLYKELQKCKYFSERRVTTYVASLARAFIYCHGKHVIHRDIKPENLLIGSQIQEIYRAYGYFLKKDYVIKEKHLRPQQRMQWRQQIQRWRLCKGGRGCWGQDW* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1162 115 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 8 67 IPR030616 GO:0004672
Gso11g1162 115 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 8 67 - -
Gso11g1162 115 Gene3D Transferase(Phosphotransferase) domain 1 3 82 - -
Gso11g1162 115 SUPERFAMILY Protein kinase-like (PK-like) 10 63 IPR011009 -
Gso11g1162 115 Pfam Protein kinase domain 10 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1162 115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Gso11g1162 115 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1162 Gso-Chr11 10404952 10411588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1162 12 61 AGC Kinase Gene Family AT1G45160 46.000 9.20e-09 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Gso11g1162 Pkinase 2.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1162 K08850 - gmx:100791102 233.417