Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1150 ATGGAACACGAGAAAGCCCCTATCTTGGTGGAAGAAAGGACAATGCAGGAAATTGAGATACCCATTGCCTCTGAAAGACTTGATGTTATTCCTATGAAGGCAGACTCATCTTGCAGTTCTGTTTGTCCTTTTTCAGGACACGAAAACAGTGCTGTGGCATCAAAAGAGTCATCAAAGAAACTCTCTGGACTCATTGTTTTCTATGCTATTGTTATGGTTGTGGAACTTATTGGTGGAATAAAAGCTCACAGCCTATCTGTCATCAGTGATGCAGCACACTTACTTTCTGATATTGCTGGATTCTCTATCTCTCTCTTTGCAGTGTGGGCTTCAGGTTGGGAGGCAACGCCGCACCAATCTTTTGGATACAATCGTCTTGAGGTTTTGGGGGCTCTTGTATCTGTGCAGTTAATTTGGTTGATATCCGGTTTTTTGATATATGAAGCAGTAGGTAGAATTCTCGTCCGAAATGGCAGTGTGAATGGAAAGCTCATGCTTGCAATTGCAGCACTTGGGTTTGTTCTTAACTTCATCATGGTTGCATGGATTGGTCATGATCATAGTCATCACCATCATTATCATCATCATCATCATCATCATCATCATCATCATCATGATGGTTGTGAAAGCTCGGGTCATGATCATAGTCATCATCAATACCAGACAGATCATGATCATGGGAAGGAGGAACAATCTAAAATAACTGATGAGGAGAATGTTACCCTGGTTTCAAGTAGTCAGACAAATACTAATGTCTTGAACATAAATCTTCAGGGGGCATATTTGCATGTCATGGCTGATATGATTCAATCTATTGGAGTGATGATTGCTGGAGCCATAATATGGGCAAAACCTGAGTGGTTTATGGTTGACCTTGTGTGTACTCTTATATTTTCTGTTTTGTCAGTAAGCACTACTCTTCCCTTGCTTAGGAATATTTATGGCATTCTGATGGAAAGGACACCAAGTGAGATCGATATTAGTAAGCTGGAAAGTGGCCTCAGAAATATCAAGGGAGTGCAGGATGTTCATGACTTGCACGTTTGGGCTATAACTGTTGGAAAATGTGTTCTGTCTTGCCACGTAGTGGCTGAGCCTGGCATAAGTTCCATTGATTTACTAGGCACGATTAAAAATTACTGTGAAAAAAAATATCAAATACAACATGTAACCATACAAATTGAATAA 1188 0.4024 MEHEKAPILVEERTMQEIEIPIASERLDVIPMKADSSCSSVCPFSGHENSAVASKESSKKLSGLIVFYAIVMVVELIGGIKAHSLSVISDAAHLLSDIAGFSISLFAVWASGWEATPHQSFGYNRLEVLGALVSVQLIWLISGFLIYEAVGRILVRNGSVNGKLMLAIAALGFVLNFIMVAWIGHDHSHHHHYHHHHHHHHHHHHDGCESSGHDHSHHQYQTDHDHGKEEQSKITDEENVTLVSSSQTNTNVLNINLQGAYLHVMADMIQSIGVMIAGAIIWAKPEWFMVDLVCTLIFSVLSVSTTLPLLRNIYGILMERTPSEIDISKLESGLRNIKGVQDVHDLHVWAITVGKCVLSCHVVAEPGISSIDLLGTIKNYCEKKYQIQHVTIQIE* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1150 395 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 8 395 - -
Gso11g1150 395 Pfam Cation efflux family 65 318 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gso11g1150 395 SUPERFAMILY Cation efflux protein transmembrane domain-like 59 319 IPR027469 -
Gso11g1150 395 MobiDBLite consensus disorder prediction 193 237 - -
Gso11g1150 395 Gene3D Cation efflux protein transmembrane domain 58 317 IPR027469 -
Gso11g1150 395 MobiDBLite consensus disorder prediction 207 236 - -
Gso11g1150 395 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 322 395 IPR036837 -
Gso11g1150 395 TIGRFAM CDF: cation diffusion facilitator family transporter 59 395 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gso11g1150 395 PANTHER METAL TOLERANCE PROTEIN B 8 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1150 Gso-Chr11 10324870 10326946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1150 1 395 Inorganic Solute Cotransporters AT2G29410 47.880 1.73e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1150 K14689 - gmx:100789520 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0487 12 4324580 4326567 Gso11g1150 11 10324870 10326946 GST