Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1142 ATGGATGATGGGCATATGCACGGCATGGGAGGGATGGCCCCAACGCCGCCATCGACAAATGGCACCACCATGACGATGATGATGCACCATAAGATGATGATGCACATGACCTTCTTCTGGGGGAAAGACGCGGATATTCTCTTCAACAACTGGCCCGGGGGTAAATCTGGAATGTACGTGTTGGCCCTGGTCTTCGTTTTCGTCATGGCCGTTCTCGTGGAGTTGCTCTCCCACACCCGCTTCATCAAACCCGGTTCGAACCATGTCGTGTCCGGTCTGATTAAGACCCTTTTGCATGTCCTCAGGGTTGGCCTCGCTTATTTGGTCATGCTCGCCCTCATGTCTTTTAACGGCGGCGTCTTCTTGGTCGCTGTTCTCGGTCACGCCTTGGGGTTTTTCGTTTCTACCGTGGCTTTCAATAAACCGCCACAAAATGAGGGCTTTGATCTTCCTCCAATTTCTTGTTAG 468 0.5214 MDDGHMHGMGGMAPTPPSTNGTTMTMMMHHKMMMHMTFFWGKDADILFNNWPGGKSGMYVLALVFVFVMAVLVELLSHTRFIKPGSNHVVSGLIKTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTVAFNKPPQNEGFDLPPISC* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1142 155 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 2 154 IPR007274 GO:0005375|GO:0016021|GO:0035434
Gso11g1142 155 PANTHER COPPER TRANSPORTER 6-LIKE 2 154 - -
Gso11g1142 155 Pfam Ctr copper transporter family 91 134 IPR007274 GO:0005375|GO:0016021|GO:0035434
Gso11g1142 155 Pfam Ctr copper transporter family 36 81 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1142 Gso-Chr11 10293693 10294496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1142 1 155 Inorganic Solute Cotransporters AT5G59030 44.186 2.78e-38 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1142 K14686 - gmx:100306175 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1142 11 10293693 10294496 Gso11g1142 11 10293693 10294496 ECH