Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1132 ATGGAGATCACTATGCAAACTTTGGAGAGAGACCTAAATGACACGAGGGGGTATTATGAGAGTGGAAAGACTAAGGAAGAGTCTTGGAGAGAATCGCAGCTCAAAGGGCTGCGTCGTTTTCTCTTGGAAAAACAAGTAGATATCATGAATGCCCTCATGCATGATTTAGGGAAACATCAACTTGAAGCTTTCAGAGACGAGATAGGAACGTTGATTAAGACCGTAAATTTGGCATTGAAGTCTTTGAAAGATTGGATGTCAGGAAAAAAGGCTGCGTTGCCACAATTAGCATTGCTCACCAGTGCAGAAATTGTTCCGGAGCCACTTGGTCTGGTTCTCATTATTTCATCTTGGAATTTCCCCATTGGAATATCCTTGGAGCCACTGATAGGAGCAGTAGCTGCGGGAAATGCAGCAGTCTTAAAGCCTTCAGAGTTGTCTCCGGCATGTTCTTCTCTACTTGCTTCTAGTCTCCCCACTTATTTGGACGATAAAGCCATTAAGGTGATCCAAGGAGGGCCACAAGAGACCCAGCAACTTCTAGAGCAAAGATGGGACAAAATCTTCTTCACAGGAAGTGCACGAGTGGGGCGGATTGTGATGTCTTCTGCTGTGAAGCATCTAACTCCTGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCAGTTGTTGATTCCCTTTCATCTTCTTGGGACAAAGAGGTCACTGTGAAGAGAATAATTGTGGGGAAATATGGGACTTGTGCTGGTCAAGCATGCATAACAATTGATTATGTCCTTGTGGAAAAGGGTTATTGTTTAAAACTGGTGGAATTGATGAAGGTCTGGATCAAGAAAATGTTTGGACAGAACCCTCGAAAATCAAAAACTATTGCTAAGATAGTTAATAAACACCACTTCTCTAGATTGAAGAATCTTCTTGCGGATAAACAGGTCAAAGGTTCTGTGGTTTATGGTGGTTCAATGGACGAACAAAACTTATTTATTGAGCCAACGATCTTGGTGGATCCCCCACTGGAAGCAGCAATTATGTCGGAAGAGATTTTTGGCCCATTGCTTCCAATTATTACCGTGGAGAAGATTGAGGACAGTATTAAATTCATAAATGCTAGACCTAAGCCTCTTGCCCTCTATGTTTTCACCAAAAACCATACACTCCAGAGAAGAATGATATCTGAAACATCATCTGGCAGTGTGACTATCAATGATGCAGTTCTACAATATGCAGCTGATACTATTCCATTTGGAGGAGTTGGGGAAAGTGGGTTTGGCATGTACCATGGGAAATTCTCCTTTGACACATTTAGCCACCAGAAAGCAATTGTAAGAAGAAGTTTCCTCACTGACTTTTGGTATAGATATCCTCCATGGACACTAAATAAGTTACAACTACTTGAAGTCTCTTACAATTATGATTATCTGGGATTGCTCCTTGTCCTGTTGGGCTTAAAGAGACCATCAAAACGCTTAATCGCAGATCATGTTTAA 1485 0.4189 MEITMQTLERDLNDTRGYYESGKTKEESWRESQLKGLRRFLLEKQVDIMNALMHDLGKHQLEAFRDEIGTLIKTVNLALKSLKDWMSGKKAALPQLALLTSAEIVPEPLGLVLIISSWNFPIGISLEPLIGAVAAGNAAVLKPSELSPACSSLLASSLPTYLDDKAIKVIQGGPQETQQLLEQRWDKIFFTGSARVGRIVMSSAVKHLTPVTLELGGKCPAVVDSLSSSWDKEVTVKRIIVGKYGTCAGQACITIDYVLVEKGYCLKLVELMKVWIKKMFGQNPRKSKTIAKIVNKHHFSRLKNLLADKQVKGSVVYGGSMDEQNLFIEPTILVDPPLEAAIMSEEIFGPLLPIITVEKIEDSIKFINARPKPLALYVFTKNHTLQRRMISETSSGSVTINDAVLQYAADTIPFGGVGESGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTLNKLQLLEVSYNYDYLGLLLVLLGLKRPSKRLIADHV* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1132 494 Pfam Aldehyde dehydrogenase family 29 440 IPR015590 GO:0016491
Gso11g1132 494 PANTHER ALDEHYDE DEHYDROGENASE 6 489 IPR012394 GO:0006081
Gso11g1132 494 SUPERFAMILY ALDH-like 18 457 IPR016161 GO:0016491
Gso11g1132 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 18 438 IPR016162 GO:0016491
Gso11g1132 494 PIRSF ALDH 1 476 IPR012394 GO:0006081
Gso11g1132 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Gso11g1132 494 PANTHER ALDEHYDE DEHYDROGENASE 6 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1132 Gso-Chr11 10203251 10206984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1132 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 52.686 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1132 K00128 - gmx:100784210 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1132 11 10203251 10206984 Gso11g1132 11 10203251 10206984 ECH
Gso12g0475 12 4233951 4237116 Gso11g1132 11 10203251 10206984 GST
Gso15g0305 15 2765996 2770366 Gso11g1132 11 10203251 10206984 PCT
Gso11g3500 11 50865925 50869562 Gso11g1132 11 10203251 10206984 PCT
Gso11g1132 11 10203251 10206984 Gso15g0305 15 2765996 2770366 PCT
Gso11g1132 11 10203251 10206984 Gso11g3500 11 50865925 50869562 PCT