Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1123 ATGGACCATGACAAGACTGGGTGCCAAGCTCCTCCTGAAGGTCCTATATTGTGCATCAACAACTGTGGATTTTTTGGAAGTGCAGCTACCATGAATATGTGTTCTAAATGCCACAAAGACATGTTGCTGAAACAGGAGCAGGCCAAGCTTGCAGCATCATCCATTGGGAATATTATGAATGGGTCTTCAAGCAGCACTGAAAAGGAACCTGTTGTTGCCGCTGCTGCTGCTAATGTTGATATCCCAGTTATTCCAGTAGAGCCTAAAACTGTCTCTGTGCAACCTTTATTTGGTTCAGGTCCAGAAGGGAGTGGTGAGGCAAAGCTGAAGGATGGACCAAAACGCTGCAGCAGCTGCAACAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGTGACCTTTTTTGTGCTGTACATCGCTACTCAGACAAGCATAATTGCCCATTTGATTACCGCACTGCTGCTCGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGATAAGATCTAA 528 0.4602 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMNGSSSSTEKEPVVAAAAANVDIPVIPVEPKTVSVQPLFGSGPEGSGEAKLKDGPKRCSSCNKRVGLTGFNCRCGDLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1123 175 SUPERFAMILY AN1-like Zinc finger 106 170 IPR035896 -
Gso11g1123 175 Gene3D - 4 70 - -
Gso11g1123 175 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Gso11g1123 175 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 175 - -
Gso11g1123 175 Pfam AN1-like Zinc finger 116 152 IPR000058 GO:0008270
Gso11g1123 175 SMART AN1_Zf_4 116 153 IPR000058 GO:0008270
Gso11g1123 175 MobiDBLite consensus disorder prediction 95 114 - -
Gso11g1123 175 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 175 - -
Gso11g1123 175 Gene3D - 99 171 IPR035896 -
Gso11g1123 175 ProSiteProfiles Zinc finger AN1-type profile. 110 156 IPR000058 GO:0008270
Gso11g1123 175 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Gso11g1123 175 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Gso11g1123 175 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1123 Gso-Chr11 10133232 10135986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1123 8 175 C2H2 Transcription Factor Family AT3G52800 42.373 3.35e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1123 - - gmx:100500070 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1123 11 10133232 10135986 Gso11g1123 11 10133232 10135986 ECH
Gso3g1192 3 37527468 37529961 Gso11g1123 11 10133232 10135986 ECH
Gso12g0468 12 4165798 4168499 Gso11g1123 11 10133232 10135986 GST