Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g1121 | ATGGATTCAGCAACAACAGCTCCTCCCCCATCGCAGGAGCTGGACTTGGACAACCTCAAACTCCTCAAAGTCCTAGGAAAAGGCGCCATGGGAACTGTCTTCCTCGTACAAGACACAACCAACACCCCCTTCGCCCTCAAAGTGGTGGACAAAACGTGCGTCCACGCGAAGCTCGACGCGGAACGGCGCGCGCGTTGGGAAATCCAAGTCCTCTCAACGCTCTCCCACCCTTTCCTCCCTTCCCTCATGGGAACGTTGGAGTCCCCACAGTTCCTGGCGTGGGCCCTACCCTACTGCCCCGGCGGCGACCTCAACTTCCTCCGCTACCGCCAAACCGACCGCTCCTTCTCCCCCGCCGTCATCCGCTTCTACGTCGCCGAAATTCTCTGCGCTCTCGACCACCTCCATTCCATGGGCATCGCCTACCGCGACCTAAAACCCGAAAATGTCCTCGTCCAAAACACCGGCCACGTCACCCTCACCGATTTCGACCTCTCCCGAAAGCTCAATCCCAAACCTAAACCTAATCCTAACCCTGTCATCGTTCCTTCAATCCCCTTGCCAAATTCCAACGTTCCCCAACCTCGCCGCAAGCACCGCCGGAATTTATCCCGGTGGATCTCCTTCTTCCCGCCGGACGGGACTAACAACAACAACAAAAACGGTCTCAAGAAGGCCAAGTCCGCGCAAGTCAGCCCGGTGAGTCGGAGAAAACCGAGTTTCTCCAGCGGCGAACGATCCAACTCGTTCGTCGGCACTGAAGAATACGTCTCGCCAGAGGTCGTCCGAGGCGACGGACATGAGTTCGCCGTCGATTGGTGGGCGCTTGGAATACTAATCTACGAAATGCTCTACGGTAAGACGCCGTTCAAGGGAAGGAATCGTAAGGAAACGTTTCGGAACGTTATCATGAAGCCGCCGGAGTTCGTCGGAAAACGAACGGCGTTAACCAACCTTATTGAAAGGTTGTTGGAGAAGGATCCGACGAAGCGTTTGGGTTACACGCGCGGTGCCGCGGAGATCAAGGAGCACGAGTTTTTCCGAGGGGTTCAGTGGGAGCTTTTGACGGAGGTGGTGCGGCCGCCGTTCATACCGTCGGGGGACGACGGCGCCGGAGAGATGACGGAGAGGTTCTCCGATCGAAATTGTGGCGTCAATATTAGGGATTACTTTCAGAATCTTAAATCGTCGCCGTCGGGCAGGTTTGAGAAGAATGTTTCGCTAAGGGAATTCTAA | 1236 | 0.5607 | MDSATTAPPPSQELDLDNLKLLKVLGKGAMGTVFLVQDTTNTPFALKVVDKTCVHAKLDAERRARWEIQVLSTLSHPFLPSLMGTLESPQFLAWALPYCPGGDLNFLRYRQTDRSFSPAVIRFYVAEILCALDHLHSMGIAYRDLKPENVLVQNTGHVTLTDFDLSRKLNPKPKPNPNPVIVPSIPLPNSNVPQPRRKHRRNLSRWISFFPPDGTNNNNKNGLKKAKSAQVSPVSRRKPSFSSGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILIYEMLYGKTPFKGRNRKETFRNVIMKPPEFVGKRTALTNLIERLLEKDPTKRLGYTRGAAEIKEHEFFRGVQWELLTEVVRPPFIPSGDDGAGEMTERFSDRNCGVNIRDYFQNLKSSPSGRFEKNVSLREF* | 412 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g1121 | 411 | Gene3D | Transferase(Phosphotransferase) domain 1 | 244 | 366 | - | - | |
Gso11g1121 | 411 | ProSiteProfiles | Protein kinase domain profile. | 19 | 347 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1121 | 411 | MobiDBLite | consensus disorder prediction | 166 | 248 | - | - | |
Gso11g1121 | 411 | Pfam | Protein kinase domain | 242 | 347 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1121 | 411 | Pfam | Protein kinase domain | 21 | 174 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1121 | 411 | Gene3D | Phosphorylase Kinase; domain 1 | 18 | 102 | - | - | |
Gso11g1121 | 411 | PANTHER | SERINE/THREONINE-PROTEIN KINASE UCNL | 14 | 398 | - | - | |
Gso11g1121 | 411 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 348 | 411 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Gso11g1121 | 411 | Gene3D | Transferase(Phosphotransferase) domain 1 | 103 | 171 | - | - | |
Gso11g1121 | 411 | MobiDBLite | consensus disorder prediction | 209 | 248 | - | - | |
Gso11g1121 | 411 | MobiDBLite | consensus disorder prediction | 172 | 190 | - | - | |
Gso11g1121 | 411 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 140 | 152 | IPR008271 | GO:0004672|GO:0006468 | |
Gso11g1121 | 411 | SMART | serkin_6 | 19 | 347 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1121 | 411 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 366 | IPR011009 | - | |
Gso11g1121 | 411 | ProSitePatterns | Protein kinases ATP-binding region signature. | 25 | 47 | IPR017441 | GO:0005524 | |
Gso11g1121 | 411 | PANTHER | FLIPPASE KINASE 1-RELATED | 14 | 398 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g1121 | Gso-Chr11 | 10098027 | 10099475 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g1121 | 14 | 399 | AGC Kinase Gene Family | AT3G20830 | 59.148 | 5.30e-159 | 452 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Gso11g1121 | Pkinase | 4.4e-34 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g1121 | - | K08286 | gmx:100782070 | 786.563 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso11g1121 | 11 | 10098027 | 10099475 | Gso11g1121 | 11 | 10098027 | 10099475 | ECH | |
Gso12g0466 | 12 | 4121204 | 4122712 | Gso11g1121 | 11 | 10098027 | 10099475 | GST | |
Gso11g3513 | 11 | 50975105 | 50976763 | Gso11g1121 | 11 | 10098027 | 10099475 | PCT | |
Gso11g1121 | 11 | 10098027 | 10099475 | Gso11g3513 | 11 | 50975105 | 50976763 | PCT |