Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1111 ATGATTGTGGAACATCTTGAAAAACAATGTGAACCTCAGCCAGGTGATATATGTTTCTTGCAATTTACCTCAGGTTCAACTAGTGATGCTAAAGGAGTGATGATCGCTCATGGTGGGCTAATTCACAATGTAAAGTTCATGCGAACAAGATACAAGAGCACCTCAAGGACAATCCTAGTAAGCTGGCTCCCTCAGTATCATGACATGGGGCTTATTGGGGGACTTTTTACATCTCTTGTTAGTGGTGGATCTGCAGTTTTATTTTCACCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATTAGCAAATATCAAGCAACTCATAGCGCTAGACCCAACTTTGCCTTTGAGTTACTGATTCGAAGATTGGAGTCTGACAAGGATAAGCTTCGGAATTTAGACCTTTCATCCTTGACTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAAAAGACCCTGAAAAGATTTATTGAGCTAACAAGTCCTTTTGGCTTATCTGAAAAAGTGATGGCTCCTGGATATGGCTTAGCAGAAGATTGTGTGTTTGTCAGCTGTGCATTTGGAGAACGCAAGCCAATCATTGTTGATTGGCAGAGAAGAATTTGTTGTGGATATGTTAATCACGAGGATGCGGATGTTGAAATTAGAATAGTTGATCCAGAGACTTGTGAAGAGCTTCAGGAAGATGGAAAGGAGGGAGAAATATGGATTAGTAATCCAAGTGCAGGCATAGGATACTGGGGAAGGGAAGAATTGAGTCAAAAAACTTTCAGGAATGAACTTCATAATCATCCTAGACGTAGCTACGCGAGAACTAGAGACTTGGGGCGAATAATAGATCAGAAGCTATTCATCACTGGAAAGATCAAGGATCTAATCATCGTTGCTGGAAGAAATATTTACTCAGCAGATGTTGAAAAGATAGTTGAGACTTCATCTGAATTTCTTCGTCCTGGTTGCTGTGCTATCATTGGAGTCCCTGAGGAAATTTTATCAGCAAAGGGAATTTCCATTCCAGATGGCTCTGATCAGGTTAGCTTAGTTGTGATTGCAGAAGGGATGGAAAGACAGTGA 1083 0.4063 MIVEHLEKQCEPQPGDICFLQFTSGSTSDAKGVMIAHGGLIHNVKFMRTRYKSTSRTILVSWLPQYHDMGLIGGLFTSLVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSARPNFAFELLIRRLESDKDKLRNLDLSSLTFLMVAAEPVRQKTLKRFIELTSPFGLSEKVMAPGYGLAEDCVFVSCAFGERKPIIVDWQRRICCGYVNHEDADVEIRIVDPETCEELQEDGKEGEIWISNPSAGIGYWGREELSQKTFRNELHNHPRRSYARTRDLGRIIDQKLFITGKIKDLIIVAGRNIYSADVEKIVETSSEFLRPGCCAIIGVPEEILSAKGISIPDGSDQVSLVVIAEGMERQ* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1111 360 Gene3D - 293 360 IPR045851 -
Gso11g1111 360 ProSitePatterns Putative AMP-binding domain signature. 20 31 IPR020845 -
Gso11g1111 360 Pfam AMP-binding enzyme 9 298 IPR000873 -
Gso11g1111 360 Gene3D - 3 292 IPR042099 -
Gso11g1111 360 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 4 355 - -
Gso11g1111 360 SUPERFAMILY Acetyl-CoA synthetase-like 10 332 - -
Gso11g1111 360 PANTHER OS04G0473900 PROTEIN 4 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1111 Gso-Chr11 9967696 9974607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1111 2 331 Monolignol Biosynthesis Gene Families AT1G20480 25.439 2.04e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1111 - - gmx:121173027 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0456 12 4017164 4020026 Gso11g1111 11 9967696 9974607 GST
Gso15g0282 15 2572426 2580300 Gso11g1111 11 9967696 9974607 PCT
Gso11g3525 11 51076789 51078513 Gso11g1111 11 9967696 9974607 PCT
Gso11g1111 11 9967696 9974607 Gso15g0282 15 2572426 2580300 PCT
Gso11g1111 11 9967696 9974607 Gso11g3525 11 51076789 51078513 PCT