Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g1093 | ATGTATCCAAAACAGTCAGGCCAAGATGGCCCTGATTCCAGACAGGTACGCTCAAGTGATAGGATCAAGACAAGGCCAAACGTTTATGGCCGGCCATATTTGTATTACAACCAAAATCATAGGCACACCAGGAAAAGCAAGATCAAGACAAGGACAGCAGCTTCACAGATTGCTAAGATGTTGCGTCCAGGGAATCGAAAATCAAAAGATTCTAATACTAATTCTGGCTCTGCCAACCTTCGACGTTCAACAAGGAAGAGAAGGCTTAATGTAAATCTTGAAGATTTTACAGACAGCTCTGGAGCTCAAGATGAAGACTTAATGAGACCACCTACATATTCATCATTGAGAAACCGGATGAAAAATAGTGTCAGACGGGATGGTTTGATGTCTAATAAGCGCAAAAGAGCAGCGGAGACTAAACAAACACCTCGACGTGAAGGTCTACGTCCTCGCCGTTCAAAGGGTGCTGCAATAGAACGATTAATTTTAGAATCAGATGATGAGCAAGACCTTTCAGAGGAAAAGGTTGATGAGGATGAAACAGAAAATGGAAATGATGCAGATGATGGCCAAAATGAGATTGAGGGGGACGCTGAGGAGGAAGATGAAGATGAGGACGAAGGTGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAGCAGGATGGAAGAAGGCGCTATGATCTTCGAAATCGTTCAGATGTCCGCAGGTTCTCTATGGAGGAAGGGAAGGCCCGGCCAAGATCTCCAAGAAGAGTGTTACATCAAGGTATGGGAACTAAGGTCAACAGAGATGTAAGGAAAGGTGGATCACGAGTTCATAAGCGTCATCGTTTAGCGAGGCCTGAAGATTCTGATGACTCCCTTCTTGTGGATGAGCTGGACCAAGGCCAAGCTATTCCATGGGGGCGAGGTGGCAACAGATCTGGTCCGCCTTGGCTATTTGGGGGCTTAGAGATGCATGGAACAACAGCTTTTGGATTAAATCTTGCTGCATCAGGTTGGGGTCATCAGGGTGATGCTGTGGCTACTCTAACTTCGGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGGGCAGATATCCAACCCTTACAGGTTGATGAGAGTGTTAGTTTTGATGATATAGGTGGGCTCTCTGAATACATTGATGCTCTTAAGGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTTTTTGCAAGTTACCACATAACTCCACCTAGGGGGGTATTGTTATGTGGGCCCCCTGGCACAGGGAAAACGTTAATTGCAAGAGCTTTGGCTTGTGCTGCTTCTAAAGCAGGCCAGAAGGTTAGCTTTTATATGCGCAAAGGAGCAGATGTGTTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAACTACTCTTTGAGGAAGCACAAAGGAATCAACCTTCTATTATCTTTTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAACAAATTCACAATTCCATTGTGTCTACTTTGCTTGCTTTGATGGATGGCCTTGACTCTCGTGGGCAAGTTGTTTTAATTGGAGCTACTAACAGGATTGATGCTATTGATGGAGCCTTACGGCGCCCTGGTAGATTTGACCGTGAGTTTAACTTTCCTCTGCCTGGTTGTGAGGCACGTGGTGAGATATTAGACATTCACACTCGTAAGTGGAAGCATCCTCCTCCAAATGAGCTGAAAAAGGAACTTGCAGCTAGTTGTGTAGGTTACTGTGGTGCTGACCTGAAGGCTCTTTGTACTGAAGCTGCCATCCGTGCATTCCGTCAAAAATATCCACAGGTTTATACTAGTGATGACAAATTTGTCATTGATGTTGATTCTGTCAAGGTAGAAAAGACTCATTTTATTGAAGCCATGTCTACCATTACTCCTGCTGCTCATAGGGGAGCTATTGTGTACTCTAGGCCTTTGTCTCTAGTAGTTCAACCATGTCTTCAGAGACATTTAGAGAAAGCCATGTGTAGTATATCTGATATTTTCCCTCCAGCTTCAATTACATCAGAGTTGACCAAACTTTCGATGCTCTCCTACGGGTCTGCAATTCCACTTGTGTATCGGCCTAGGCTTCTGCTTTGTGGTGGTGAAGGTACAGGGCTGGATCATCTTGGCCCTGCGGTTTTACATGAGCTGGAAAAATTTCCCGTACATTCATTAGGACTTCCATCTCTTCTGTCAGATCCTAGTGCAAAGACACCAGAGGAGGCATTGGTACATATATTTGGTGAATCTAGAAGAACAACACCATCAATTCTCTATTTACCACAATTTGATGTTTGGTGGGAGACTGCTCATGAACAGCTCCGGGCTGTTCTCCTGACTTTGCTAGAAGAATTACCATCTGACTTGCCTATCTTACTGCTTGGTACATCCTCAGTTGCACTTTCTGAAGTTGAGGAAGTGCCTACTTCCATTTTCCCTCATCGCTCAGTTTATGAAGTGAATATGCCATGTGCCAAAGATAGGACTTTGTTTTTCAATGTTTTGATAGAAGCTGCTATGTCAATATTGTTGGAGGGAATCAACAAGAAATCTCAAGACACCGGATGTCTCCCAGAACTTCCCAAGGCACCGAAATTGGCTAGTGGTCCAAAAGTATCTGAGCTAAAAGCAAAGGTGGAAGCTGAGCAACATGCACTTCGTAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATTCTGTATGACAAACGATTTAATGCCTTCCATTATCCAGTGACAGATGAAGATGCACCAAATTATCGTTCAATTATACAGAACCCAATGGACGTGGCTACCATCCTGCATCATGTTGATAATGGTGACTATATTACAAGTGCTGCATTCCTGCAGGACATCAATCTCATTGTTTCCAATGCAAAGGCTTACAATGGAGAGGACTACAATGGTGCTAGGATTGTTAGTAGAGCTTGCGAGCTCCGTGATGCGGTGCATGGGATGCTCTCACAGATGGATCCAGCACTGGTTGCATATTGTGAAAAGATTGCTAGCCAAGGTGGCCCAGTTCAGTTGTCTGATGAATTAGGGGATTCTACATTCCCTGCTACTCCTGTTGTGCTGCTGGGTCAAAGTACTAGAATGAGTGCTCGACTTCGCCATGTCCAACCAGAAGTTAATATGAATCAGAGTTACGAAGTATTGAAGCGAACTAAGAAGATCGCTGAAGTGCATGCAGCAGAAGACAAGTCACAAGAAGATTCGGTACCCCCAAAGTCTTCCCAGGAGCATCAAGCCAATGACACAAATTCTGAAAGGCTGGAAAATGTGTCAATTGAAGGAGATTTGCATGGAACTTGTACAAATAACCTTGCTGATGGCAACAGTCCTGATGATGTCACAATGCTAGATGGTGAATTTTCAGGAGAAGTAGAGTCTGTCAAGCAGCTTTTTGTGAAGCGTAGTGAAAATTACAGCATTCCACAACTTGAAAGGCTTTACACGAGAGTTATGAAGGGCGTGTTTGAAACCAAAAATAAAGGAGTGAATGGGGATCTTAAGTCTTCGGTTTTGAAGTTTTTGTTGAATTTTGTAGAGGATGATGCAAATTTCTAA | 3591 | 0.4383 | MYPKQSGQDGPDSRQVRSSDRIKTRPNVYGRPYLYYNQNHRHTRKSKIKTRTAASQIAKMLRPGNRKSKDSNTNSGSANLRRSTRKRRLNVNLEDFTDSSGAQDEDLMRPPTYSSLRNRMKNSVRRDGLMSNKRKRAAETKQTPRREGLRPRRSKGAAIERLILESDDEQDLSEEKVDEDETENGNDADDGQNEIEGDAEEEDEDEDEGDEDGDDEEGEEEQDGRRRYDLRNRSDVRRFSMEEGKARPRSPRRVLHQGMGTKVNRDVRKGGSRVHKRHRLARPEDSDDSLLVDELDQGQAIPWGRGGNRSGPPWLFGGLEMHGTTAFGLNLAASGWGHQGDAVATLTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARGEILDIHTRKWKHPPPNELKKELAASCVGYCGADLKALCTEAAIRAFRQKYPQVYTSDDKFVIDVDSVKVEKTHFIEAMSTITPAAHRGAIVYSRPLSLVVQPCLQRHLEKAMCSISDIFPPASITSELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGESRRTTPSILYLPQFDVWWETAHEQLRAVLLTLLEELPSDLPILLLGTSSVALSEVEEVPTSIFPHRSVYEVNMPCAKDRTLFFNVLIEAAMSILLEGINKKSQDTGCLPELPKAPKLASGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVTDEDAPNYRSIIQNPMDVATILHHVDNGDYITSAAFLQDINLIVSNAKAYNGEDYNGARIVSRACELRDAVHGMLSQMDPALVAYCEKIASQGGPVQLSDELGDSTFPATPVVLLGQSTRMSARLRHVQPEVNMNQSYEVLKRTKKIAEVHAAEDKSQEDSVPPKSSQEHQANDTNSERLENVSIEGDLHGTCTNNLADGNSPDDVTMLDGEFSGEVESVKQLFVKRSENYSIPQLERLYTRVMKGVFETKNKGVNGDLKSSVLKFLLNFVEDDANF* | 1197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g1093 | 1196 | MobiDBLite | consensus disorder prediction | 167 | 219 | - | - | |
Gso11g1093 | 1196 | CDD | AAA | 408 | 547 | - | - | |
Gso11g1093 | 1196 | PANTHER | BNAC08G44480D PROTEIN | 1 | 1191 | - | - | |
Gso11g1093 | 1196 | SUPERFAMILY | Bromodomain | 890 | 1004 | IPR036427 | GO:0005515 | |
Gso11g1093 | 1196 | MobiDBLite | consensus disorder prediction | 220 | 250 | - | - | |
Gso11g1093 | 1196 | Pfam | ATPase family associated with various cellular activities (AAA) | 412 | 547 | IPR003959 | GO:0005524|GO:0016887 | |
Gso11g1093 | 1196 | Gene3D | - | 548 | 633 | - | - | |
Gso11g1093 | 1196 | MobiDBLite | consensus disorder prediction | 120 | 166 | - | - | |
Gso11g1093 | 1196 | MobiDBLite | consensus disorder prediction | 1070 | 1098 | - | - | |
Gso11g1093 | 1196 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 370 | 637 | IPR027417 | - | |
Gso11g1093 | 1196 | Gene3D | - | 884 | 1012 | IPR036427 | GO:0005515 | |
Gso11g1093 | 1196 | CDD | Bromo_AAA | 892 | 1002 | - | - | |
Gso11g1093 | 1196 | Gene3D | - | 370 | 640 | IPR027417 | - | |
Gso11g1093 | 1196 | Pfam | Bromodomain | 905 | 973 | IPR001487 | GO:0005515 | |
Gso11g1093 | 1196 | PRINTS | Bromodomain signature | 924 | 940 | IPR001487 | GO:0005515 | |
Gso11g1093 | 1196 | PRINTS | Bromodomain signature | 940 | 958 | IPR001487 | GO:0005515 | |
Gso11g1093 | 1196 | PRINTS | Bromodomain signature | 958 | 977 | IPR001487 | GO:0005515 | |
Gso11g1093 | 1196 | SMART | AAA_5 | 408 | 549 | IPR003593 | - | |
Gso11g1093 | 1196 | PANTHER | AAA DOMAIN-CONTAINING | 1 | 1191 | IPR045199 | - | |
Gso11g1093 | 1196 | MobiDBLite | consensus disorder prediction | 1 | 287 | - | - | |
Gso11g1093 | 1196 | Pfam | AAA+ lid domain | 574 | 611 | IPR041569 | - | |
Gso11g1093 | 1196 | ProSiteProfiles | Bromodomain profile. | 915 | 977 | IPR001487 | GO:0005515 | |
Gso11g1093 | 1196 | SMART | bromo_6 | 892 | 999 | IPR001487 | GO:0005515 | |
Gso11g1093 | 1196 | ProSitePatterns | AAA-protein family signature. | 517 | 535 | IPR003960 | GO:0005524|GO:0016887 | |
Gso11g1093 | 1196 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 696 | 925 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g1093 | Gso-Chr11 | 9765934 | 9773625 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g1093 | 358 | 612 | Calmodulin-binding Proteins | AT3G56690 | 37.066 | 3.75e-42 | 166 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g1093 | K22531 | - | gmx:100783127 | 2300.4 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso11g1093 | 11 | 9765934 | 9773625 | Gso11g1093 | 11 | 9765934 | 9773625 | ECH | |
Gso12g0440 | 12 | 3843637 | 3851545 | Gso11g1093 | 11 | 9765934 | 9773625 | GST |