Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1087 ATGGGGTTCTCATTAAAACACCAATCAATCTACGGTTTCAATGTGAACCAATGTTTACTTGGGCTTCTACTTGACCTGGTGGTTTTGTCACACTTGTGGTTGCAAGTTACAAGCCTTGGTTCCATGTCATCCATTGCCACCTCTTACGGAGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGATCAAACTCAGCCATAATCTACGGAACACCAACACATTTTTCATTCCTTGGCCTAACAGCTGGAGAAGGCTTTGTATGTGGTCTTCTAATGGGTTCTAATCAACCATACTGTTGGGGAAGCAGTTCCTACATTGAAATGGGAGTGCCTCAACCTATGATCAAAGGAGCACAGTACCTAGAAATCAGTGCTGGTGATTACCATGTCTGTGGCTTGAGGAAACCTATGACTGGAAGGCACAGGAACGTTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAGAACTATGTGGTTGGTGGAATGATTCAATCAATCTCAGCAGGTTCTGAATTCAACTGTGGCCTTTTTTCTCAGAACAGGACTGCGTTCTGCTGGGGAGATGAGACTAACAGCCTAGTCATTAGTTTGATTCCACATGACATGAGATTCCGGAAAATTTCAGCTGGGGGGTACCATGTGTGTGGAATCTCAGAAGGGGTGAACTCCAAAACTTTTTGTTGGGGGAGAAGCTTGAACCTTGAGGAAGAAATTTCAGTGTCACATGCAGGTCAAGGAAACGTTGATTTGGCACCAAATGACCCTATGCTTTCTTTAGTGGGAGGGAAGTTCCATGCATGTGGCATTAAGAGCTATGACCGTGGAGTTATTTGTTGGGGATTTATCATCAAACCAAGTTCACCATCTCCTAAAGGGATTAAGGTTTTTGAAGTTGCTGCTGGTGATTACTTTACTTGTGCAGTTCTTGCTGACAAATCTCTTATGCCTTTATGTTGGGGTGTTGGCTTTCCCACTTCTCTTCCTTTAGCTGTTTCACCAGGAATGTGCCAACCTTCTCCATGTGCTCCTGGCTCCTATGCAATTGATAAGCATAAGAGTCTTTGCAAGTCACCGGATTCTCGTGTTTGCATGAGGTGCAGTGGTGCTTGTCCTCCTGAAATGTATCTGAAGAGTGCATGCAATTTGGCATATGATAGAGTGTGTGAATATAACTGTTCCTCTTGTTCTTCATCTGAATGCTTCTTGAACTGCTCCTCTTCATATTCCAATGCTGCTGCTTCTACTGAGAAGAAAAGTGAAAAAATTTGGGCTCTGCAGTTGCCAGTTCTCATTGCTGAGATTGCTTTTGCAGTTTTCGTAGTTAGTATTATGTCAATAACTACGGTTTTATACGTCCGCTACAGGCTAAGAGATTGTGAGTGTTCAAAAGGGTCAGGGGTGAAGAAACTTGGTGGAAATTCTTCCTTCCAAAACGAGAACAAGGTGAGGCCAGACTTGGAGGAACTTAATAAGATCAGAAGGGCTCAAATATTCACCTATGAGGAGCTTGAAACTGCAACCGGTGGATTCAAGGAAGAGTCCATAGTAGGGAAGGGAAGTTTTTCTTGTGTGTTCAAGGGAGTTTTCAAAGATGGGACAGTTGTTGCTGTCAAAAGGGCTATAGTGTCTCCCAACATGCAGAAGAACTCCAAGGAGTTTAACACTGAACTTGACTTGCTCTCAAGGTTGAACCATGCTCATTTGCTCAACCTTCTAGGGTATTGCGAAGAAGGTGAAGAGAGGCTTCTTGTGTATGAGTTCATGGCTCACGGATCTTTGCACCAACACTTGCATGGAACAAACCAAGTGTTGAGAGAGCAACTAGATTGGATAAGAAGGGTCACAATTGCAGTTCAAGCGGCACGTGGAATCGAATACTTGCATGGATATGCTTGCCCTCCAGTGATTCATAGAGACATCAAGTCCTCAAACATTCTCATTGATGAAGAACACAATGCAAGAGTGGCTGATTTTGGTTTATCATTGTTAGGTCCTGCAGACAGTGGTTCCCCTTTGGCTGAACTCCCAGCTGGGACTCTTGGCTATCTTGATCCTGAGTACTATAGGCTTCACTACCTCACAACAAAATCTGATGTCTATAGCTTTGGTGTTCTCCTTTTGGAGATTCTAAGTGGTAGAAAAGCAATTGACATGCAATATGAAGAATGCAACATAGTGGAATGGGCAGTGCCTCTTATCAAATCAGGAGACATAACTGCGATTTCAGACCCGGTTTTAAAGCCTCCTCCTGATCTTGAAGCATTGAAGAGAATAGCAAATGTGGCTTGTAAGTGTGTGAGAATGAGAGGGAAAGAGAGGCCCTCAATGGATAAAGTAACAACAGCTTTGGAGAGAGGTCTTGCACAGTTAATGGGAAGTCCATGCATTGAGCAGCCTATTTTGCCCACTGAGGTGGTTTTGGGAAGCAACAGATTGCACAAGAAGTCATCTCAAAGGTCTTCAAACAGGTCAGTTTCTGAGACTGATGTGGCAGAAACTGAGGACCAAAGGTTTGAGTTTAGAGCACCCTCATGGATAACTTTCCCTAGTGTGGCATCTTCTCAGAGGAGAAAATCATCAGTGTCTGAGGAAGATGTAGATGGGAAGAACAATAATGCAGAAGGGAAGAACTTGGGCAATGTTGATGTTTTGAGAAGCCTTGAGGAAGAGATTGGTCCTGCTTCTCCAAGAGAGAGGATGTTCTTGCAGCACAACTTCTAA 2751 0.4369 MGFSLKHQSIYGFNVNQCLLGLLLDLVVLSHLWLQVTSLGSMSSIATSYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYGTPTHFSFLGLTAGEGFVCGLLMGSNQPYCWGSSSYIEMGVPQPMIKGAQYLEISAGDYHVCGLRKPMTGRHRNVSLVDCWGYNMTKNYVVGGMIQSISAGSEFNCGLFSQNRTAFCWGDETNSLVISLIPHDMRFRKISAGGYHVCGISEGVNSKTFCWGRSLNLEEEISVSHAGQGNVDLAPNDPMLSLVGGKFHACGIKSYDRGVICWGFIIKPSSPSPKGIKVFEVAAGDYFTCAVLADKSLMPLCWGVGFPTSLPLAVSPGMCQPSPCAPGSYAIDKHKSLCKSPDSRVCMRCSGACPPEMYLKSACNLAYDRVCEYNCSSCSSSECFLNCSSSYSNAAASTEKKSEKIWALQLPVLIAEIAFAVFVVSIMSITTVLYVRYRLRDCECSKGSGVKKLGGNSSFQNENKVRPDLEELNKIRRAQIFTYEELETATGGFKEESIVGKGSFSCVFKGVFKDGTVVAVKRAIVSPNMQKNSKEFNTELDLLSRLNHAHLLNLLGYCEEGEERLLVYEFMAHGSLHQHLHGTNQVLREQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEECNIVEWAVPLIKSGDITAISDPVLKPPPDLEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSVSETDVAETEDQRFEFRAPSWITFPSVASSQRRKSSVSEEDVDGKNNNAEGKNLGNVDVLRSLEEEIGPASPRERMFLQHNF* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1087 916 Gene3D - 88 344 IPR009091 -
Gso11g1087 916 MobiDBLite consensus disorder prediction 821 837 - -
Gso11g1087 916 SUPERFAMILY Protein kinase-like (PK-like) 499 793 IPR011009 -
Gso11g1087 916 SUPERFAMILY RCC1/BLIP-II 20 291 IPR009091 -
Gso11g1087 916 MobiDBLite consensus disorder prediction 862 891 - -
Gso11g1087 916 Gene3D Phosphorylase Kinase; domain 1 489 597 - -
Gso11g1087 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Gso11g1087 916 Gene3D Transferase(Phosphotransferase) domain 1 598 801 - -
Gso11g1087 916 MobiDBLite consensus disorder prediction 821 844 - -
Gso11g1087 916 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Gso11g1087 916 ProSiteProfiles Protein kinase domain profile. 520 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1087 916 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 15 916 - -
Gso11g1087 916 Pfam Protein kinase domain 520 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g1087 916 PANTHER RECEPTOR-LIKE KINASE 15 916 - -
Gso11g1087 916 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 350 398 IPR001368 GO:0005515
Gso11g1087 916 SMART serkin_6 520 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1087 Gso-Chr11 9718650 9722400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1087 22 916 Receptor kinase-like Gene Family AT3G59420 67.073 0.0 1227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso11g1087 Pkinase 8.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1087 - - gmx:100816264 1821.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1087 11 9718650 9722400 Gso11g1087 11 9718650 9722400 ECH
Gso12g0436 12 3792547 3796244 Gso11g1087 11 9718650 9722400 GST
Gso11g1087 11 9718650 9722400 Gso15g0268 15 2428970 2432182 PCT
Gso11g1087 11 9718650 9722400 Gso11g3541 11 51205169 51208864 PCT