Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g1087 | ATGGGGTTCTCATTAAAACACCAATCAATCTACGGTTTCAATGTGAACCAATGTTTACTTGGGCTTCTACTTGACCTGGTGGTTTTGTCACACTTGTGGTTGCAAGTTACAAGCCTTGGTTCCATGTCATCCATTGCCACCTCTTACGGAGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGATCAAACTCAGCCATAATCTACGGAACACCAACACATTTTTCATTCCTTGGCCTAACAGCTGGAGAAGGCTTTGTATGTGGTCTTCTAATGGGTTCTAATCAACCATACTGTTGGGGAAGCAGTTCCTACATTGAAATGGGAGTGCCTCAACCTATGATCAAAGGAGCACAGTACCTAGAAATCAGTGCTGGTGATTACCATGTCTGTGGCTTGAGGAAACCTATGACTGGAAGGCACAGGAACGTTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAGAACTATGTGGTTGGTGGAATGATTCAATCAATCTCAGCAGGTTCTGAATTCAACTGTGGCCTTTTTTCTCAGAACAGGACTGCGTTCTGCTGGGGAGATGAGACTAACAGCCTAGTCATTAGTTTGATTCCACATGACATGAGATTCCGGAAAATTTCAGCTGGGGGGTACCATGTGTGTGGAATCTCAGAAGGGGTGAACTCCAAAACTTTTTGTTGGGGGAGAAGCTTGAACCTTGAGGAAGAAATTTCAGTGTCACATGCAGGTCAAGGAAACGTTGATTTGGCACCAAATGACCCTATGCTTTCTTTAGTGGGAGGGAAGTTCCATGCATGTGGCATTAAGAGCTATGACCGTGGAGTTATTTGTTGGGGATTTATCATCAAACCAAGTTCACCATCTCCTAAAGGGATTAAGGTTTTTGAAGTTGCTGCTGGTGATTACTTTACTTGTGCAGTTCTTGCTGACAAATCTCTTATGCCTTTATGTTGGGGTGTTGGCTTTCCCACTTCTCTTCCTTTAGCTGTTTCACCAGGAATGTGCCAACCTTCTCCATGTGCTCCTGGCTCCTATGCAATTGATAAGCATAAGAGTCTTTGCAAGTCACCGGATTCTCGTGTTTGCATGAGGTGCAGTGGTGCTTGTCCTCCTGAAATGTATCTGAAGAGTGCATGCAATTTGGCATATGATAGAGTGTGTGAATATAACTGTTCCTCTTGTTCTTCATCTGAATGCTTCTTGAACTGCTCCTCTTCATATTCCAATGCTGCTGCTTCTACTGAGAAGAAAAGTGAAAAAATTTGGGCTCTGCAGTTGCCAGTTCTCATTGCTGAGATTGCTTTTGCAGTTTTCGTAGTTAGTATTATGTCAATAACTACGGTTTTATACGTCCGCTACAGGCTAAGAGATTGTGAGTGTTCAAAAGGGTCAGGGGTGAAGAAACTTGGTGGAAATTCTTCCTTCCAAAACGAGAACAAGGTGAGGCCAGACTTGGAGGAACTTAATAAGATCAGAAGGGCTCAAATATTCACCTATGAGGAGCTTGAAACTGCAACCGGTGGATTCAAGGAAGAGTCCATAGTAGGGAAGGGAAGTTTTTCTTGTGTGTTCAAGGGAGTTTTCAAAGATGGGACAGTTGTTGCTGTCAAAAGGGCTATAGTGTCTCCCAACATGCAGAAGAACTCCAAGGAGTTTAACACTGAACTTGACTTGCTCTCAAGGTTGAACCATGCTCATTTGCTCAACCTTCTAGGGTATTGCGAAGAAGGTGAAGAGAGGCTTCTTGTGTATGAGTTCATGGCTCACGGATCTTTGCACCAACACTTGCATGGAACAAACCAAGTGTTGAGAGAGCAACTAGATTGGATAAGAAGGGTCACAATTGCAGTTCAAGCGGCACGTGGAATCGAATACTTGCATGGATATGCTTGCCCTCCAGTGATTCATAGAGACATCAAGTCCTCAAACATTCTCATTGATGAAGAACACAATGCAAGAGTGGCTGATTTTGGTTTATCATTGTTAGGTCCTGCAGACAGTGGTTCCCCTTTGGCTGAACTCCCAGCTGGGACTCTTGGCTATCTTGATCCTGAGTACTATAGGCTTCACTACCTCACAACAAAATCTGATGTCTATAGCTTTGGTGTTCTCCTTTTGGAGATTCTAAGTGGTAGAAAAGCAATTGACATGCAATATGAAGAATGCAACATAGTGGAATGGGCAGTGCCTCTTATCAAATCAGGAGACATAACTGCGATTTCAGACCCGGTTTTAAAGCCTCCTCCTGATCTTGAAGCATTGAAGAGAATAGCAAATGTGGCTTGTAAGTGTGTGAGAATGAGAGGGAAAGAGAGGCCCTCAATGGATAAAGTAACAACAGCTTTGGAGAGAGGTCTTGCACAGTTAATGGGAAGTCCATGCATTGAGCAGCCTATTTTGCCCACTGAGGTGGTTTTGGGAAGCAACAGATTGCACAAGAAGTCATCTCAAAGGTCTTCAAACAGGTCAGTTTCTGAGACTGATGTGGCAGAAACTGAGGACCAAAGGTTTGAGTTTAGAGCACCCTCATGGATAACTTTCCCTAGTGTGGCATCTTCTCAGAGGAGAAAATCATCAGTGTCTGAGGAAGATGTAGATGGGAAGAACAATAATGCAGAAGGGAAGAACTTGGGCAATGTTGATGTTTTGAGAAGCCTTGAGGAAGAGATTGGTCCTGCTTCTCCAAGAGAGAGGATGTTCTTGCAGCACAACTTCTAA | 2751 | 0.4369 | MGFSLKHQSIYGFNVNQCLLGLLLDLVVLSHLWLQVTSLGSMSSIATSYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYGTPTHFSFLGLTAGEGFVCGLLMGSNQPYCWGSSSYIEMGVPQPMIKGAQYLEISAGDYHVCGLRKPMTGRHRNVSLVDCWGYNMTKNYVVGGMIQSISAGSEFNCGLFSQNRTAFCWGDETNSLVISLIPHDMRFRKISAGGYHVCGISEGVNSKTFCWGRSLNLEEEISVSHAGQGNVDLAPNDPMLSLVGGKFHACGIKSYDRGVICWGFIIKPSSPSPKGIKVFEVAAGDYFTCAVLADKSLMPLCWGVGFPTSLPLAVSPGMCQPSPCAPGSYAIDKHKSLCKSPDSRVCMRCSGACPPEMYLKSACNLAYDRVCEYNCSSCSSSECFLNCSSSYSNAAASTEKKSEKIWALQLPVLIAEIAFAVFVVSIMSITTVLYVRYRLRDCECSKGSGVKKLGGNSSFQNENKVRPDLEELNKIRRAQIFTYEELETATGGFKEESIVGKGSFSCVFKGVFKDGTVVAVKRAIVSPNMQKNSKEFNTELDLLSRLNHAHLLNLLGYCEEGEERLLVYEFMAHGSLHQHLHGTNQVLREQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEECNIVEWAVPLIKSGDITAISDPVLKPPPDLEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSVSETDVAETEDQRFEFRAPSWITFPSVASSQRRKSSVSEEDVDGKNNNAEGKNLGNVDVLRSLEEEIGPASPRERMFLQHNF* | 917 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g1087 | 916 | Gene3D | - | 88 | 344 | IPR009091 | - | |
Gso11g1087 | 916 | MobiDBLite | consensus disorder prediction | 821 | 837 | - | - | |
Gso11g1087 | 916 | SUPERFAMILY | Protein kinase-like (PK-like) | 499 | 793 | IPR011009 | - | |
Gso11g1087 | 916 | SUPERFAMILY | RCC1/BLIP-II | 20 | 291 | IPR009091 | - | |
Gso11g1087 | 916 | MobiDBLite | consensus disorder prediction | 862 | 891 | - | - | |
Gso11g1087 | 916 | Gene3D | Phosphorylase Kinase; domain 1 | 489 | 597 | - | - | |
Gso11g1087 | 916 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 645 | 657 | IPR008271 | GO:0004672|GO:0006468 | |
Gso11g1087 | 916 | Gene3D | Transferase(Phosphotransferase) domain 1 | 598 | 801 | - | - | |
Gso11g1087 | 916 | MobiDBLite | consensus disorder prediction | 821 | 844 | - | - | |
Gso11g1087 | 916 | ProSitePatterns | Protein kinases ATP-binding region signature. | 526 | 548 | IPR017441 | GO:0005524 | |
Gso11g1087 | 916 | ProSiteProfiles | Protein kinase domain profile. | 520 | 811 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1087 | 916 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 | 15 | 916 | - | - | |
Gso11g1087 | 916 | Pfam | Protein kinase domain | 520 | 789 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g1087 | 916 | PANTHER | RECEPTOR-LIKE KINASE | 15 | 916 | - | - | |
Gso11g1087 | 916 | ProSiteProfiles | TNFR/NGFR family cysteine-rich region domain profile. | 350 | 398 | IPR001368 | GO:0005515 | |
Gso11g1087 | 916 | SMART | serkin_6 | 520 | 798 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g1087 | Gso-Chr11 | 9718650 | 9722400 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g1087 | 22 | 916 | Receptor kinase-like Gene Family | AT3G59420 | 67.073 | 0.0 | 1227 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Gso11g1087 | Pkinase | 8.9e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g1087 | - | - | gmx:100816264 | 1821.98 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso11g1087 | 11 | 9718650 | 9722400 | Gso11g1087 | 11 | 9718650 | 9722400 | ECH | |
Gso12g0436 | 12 | 3792547 | 3796244 | Gso11g1087 | 11 | 9718650 | 9722400 | GST | |
Gso11g1087 | 11 | 9718650 | 9722400 | Gso15g0268 | 15 | 2428970 | 2432182 | PCT | |
Gso11g1087 | 11 | 9718650 | 9722400 | Gso11g3541 | 11 | 51205169 | 51208864 | PCT |