Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1084 ATGGAGGTTGAGATTGATGGCTCTGTTACTGTCGAAACAGTAGGAAATACTGCTATAGGTGAGGTTAGTAGCATAGCGGATGACAACAGAGAAGGTGGAAGTTCTGTTGAACCAAATGACAACCAAGATCAACATGATAATGGGACTCAAGATTCCTCTGGAGGGATCACTATCCCATCTGCAATTCCCACAGTATCGGTTGTTTCAGTTGAAGAGCCCTATGTTGGTCAGGAGTTTGGGTCAGAAGCAGCAGCACATGCATTTTATAATGCTTATGCCACAGAAGTTGGATTTATCGTACGTGTGAGTAAACTCTCGCGGTCAAGGCGTGATGGAACTGCTATTGGACGTACTCTTGTTTGCAACAAAGAGGGATTCAGAATGGCTGACAAACGTGAAAAGATTGTGAGGCAAAGGGCCGAGACCAGGGTTGGTTGCAGGGCAATGATTATGGTGAGGAAACTTAGTTCTGGCAAATGGGTTGTTGCAAAGTTTGTGAAGGAACACACACATCCTTTGACCCCTGGCAAAGGTAGAAGGGATTTCTACTATGAACAATATCCGACTGAACAGGATAAAATTCGGGAACTATCTCAACAGTTGGCAACTGAGAAAAAGCGATCTGCGGCCTATAAAAGACATCTTGAATTGATATTTGAGCAAATTGAAGAGCAGAATGATAACCTTTCAAAGAAAATACAGCACATAGTAGACTGCGTGAAGGAGATGGAAGCCAAAGAAGAACATAGTAGACAGTGTGAAGGAGATGGAAGCCAAAGAACAACAGAGTAG 792 0.4331 MEVEIDGSVTVETVGNTAIGEVSSIADDNREGGSSVEPNDNQDQHDNGTQDSSGGITIPSAIPTVSVVSVEEPYVGQEFGSEAAAHAFYNAYATEVGFIVRVSKLSRSRRDGTAIGRTLVCNKEGFRMADKREKIVRQRAETRVGCRAMIMVRKLSSGKWVVAKFVKEHTHPLTPGKGRRDFYYEQYPTEQDKIRELSQQLATEKKRSAAYKRHLELIFEQIEEQNDNLSKKIQHIVDCVKEMEAKEEHSRQCEGDGSQRTTE* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1084 263 Coils Coil 194 232 - -
Gso11g1084 263 MobiDBLite consensus disorder prediction 19 58 - -
Gso11g1084 263 Pfam FAR1 DNA-binding domain 88 174 IPR004330 -
Gso11g1084 263 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 250 - -
Gso11g1084 263 MobiDBLite consensus disorder prediction 35 58 - -
Gso11g1084 263 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1084 Gso-Chr11 9690619 9693806 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso11g1084 FAR1 1.5e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1084 - - gmx:100780613 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1084 11 9690619 9693806 Gso11g1084 11 9690619 9693806 ECH
Gso12g0433 12 3768097 3771139 Gso11g1084 11 9690619 9693806 GST
Gso15g0267 15 2424825 2428097 Gso11g1084 11 9690619 9693806 PCT
Gso11g1084 11 9690619 9693806 Gso15g0267 15 2424825 2428097 PCT