Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1064 ATGACATCCTTGGTTATGCCTACCATGGCCTCCTCTCTGCTTCTCCAACTTGGTTCTACTTGTGGTAAAAGTCCCTCTTTTGCTCCTCCTCAAAGCATTTTGGTTGACAAACTTCGAAGATTAGTGATTAAAGTCAAGTCCTCAGAGACAAGGGAATGCACCACAGCTATGTTTAATGCCAATTCACGTAGAGACTTTCTTGGGTTAGCTTTAGGAGTCTCGGGTCTCTTCATCGGTTCGCTGGATGCAAATGGAGCTGGTTTGCCCCCAGAGGAAAAGCCTAAACTGTGTGATGACACTTGTGAGAAAGAGCTTGAAAATGTGCCTACGGTAACTACTGGATCAGGTTTGCAATACAAGGATATTAAAGTTGGACAAGGTCCTAGTCCACCAATTGGATTTCAGGTGGCTGCTAATTATGTTGCAATGGTTCCCTCCGGACAAATATTTGATAGTTCACTGGAGAAAGGTCAGCCTTATATTTTTCGTGTTGGTTCTGGTCAGGTGATACAAGGACTTGATGAAGGTATTCTGAGCATGAAAGTAGGAGGGAAACGTCGACTGTACATACCCGGATCACTGGCATTCCCAAAAGGCCTTACTTCTGCTCCTGGAAGACCAAGGGTGGCTCCAAGCAGTCCAGTCATATTTGATGTTAGTTTGGAATACATACCGGGGCTTGAAGTGGATGAGGAATAA 699 0.4478 MTSLVMPTMASSLLLQLGSTCGKSPSFAPPQSILVDKLRRLVIKVKSSETRECTTAMFNANSRRDFLGLALGVSGLFIGSLDANGAGLPPEEKPKLCDDTCEKELENVPTVTTGSGLQYKDIKVGQGPSPPIGFQVAANYVAMVPSGQIFDSSLEKGQPYIFRVGSGQVIQGLDEGILSMKVGGKRRLYIPGSLAFPKGLTSAPGRPRVAPSSPVIFDVSLEYIPGLEVDEE* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1064 232 Gene3D - 95 224 IPR046357 GO:0003755
Gso11g1064 232 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 32 232 - -
Gso11g1064 232 SUPERFAMILY FKBP-like 99 221 - -
Gso11g1064 232 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 133 225 IPR001179 GO:0003755
Gso11g1064 232 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 132 221 IPR001179 GO:0003755
Gso11g1064 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC 32 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1064 Gso-Chr11 9505498 9509443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1064 115 221 Calmodulin-binding Proteins AT3G25230 37.037 3.46e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1064 K01802 - gmx:100818743 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1064 11 9505498 9509443 Gso11g1064 11 9505498 9509443 ECH
Gso12g0411 12 3588957 3592503 Gso11g1064 11 9505498 9509443 GST