Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1026 ATGGACAAAAGAGGTGCCAAGGTTGATGGCAAAAAGTCTGCACCGCCCAAAAATGAGACACAAAACTTGTCAAGATCCTTGCCATCTCCATGGTCTACTTCTACGCAGGCTTATCATAATGTTGAGCATGCTGCAACTTCCAATGTAAATCCAGCTACTTCTCTTTTTTATCCCTCCTGGTCGGGAAGTCAGATGCCAACAGCATATGATGCAATGTATCAAAGTTGGTCATTCTCCAACATTTATCCAATGGCAGCAGCAGAGGTTGGACAATGTTGTCTATTAGATTCTGGAGATGAAATGCAAAGGATTTCTTGTGACAAGAGCTTACAACCTTCAATCCCAAAAACCAATGGGGAAGGACTACCAAGGAGTGTGACTAGCGAAAGCAAGGAAACAACAGTTGTAGGCCATGATGTTAAGAATGCCGGTGCAGCAACAACATTTAAAATAAAGGAAAGTGATGAAACAAAAGAAAGAAGAAAAAGGCAGAAAAATATGATATCAGACAAGAGAAAAAAGAGAAAGATCATGAAGCTGCAGGATATCCCTTCAACTAGGCAGGGGCAGTCCAGTATGATGCAAGGAAATGGGCCAGCTTCACAGAATGTGAGTAGTAATGAAACTTGCAATGTTATTGCATCTGATCATTTTGAAGCAAATCCAACTGAGCTGCAGAATCAGAAGTTGGGTACAGAACCCGATGCATGTGGCAGTAAGCCTCAACTGAAAAGAAAGGAAACTGCTGAAGAAAAAGAACAAAGAAGAAAGCATCAAAAGAAGATAGCATCTAAGAGATCAAGGATGAAGATAAAGATAGAACGTGAAAAGATAATTGATTCCTTGGAGAGTCTTGATGATGAAAATGCTGTTCTCAGGGAAGAGCTTCATGCCCGTACTATTGAGTGTGAGAGGATCGAAAAAGAAAACAATGCCTTACTGGCAGAACTCATTGAGCAGTATGGGGAAGAAACAGTAATGAATCTTTTGAAGGCACAGTCTACTGACTCAGTTGCTGGGGGTGGTCAAGGCTCAAACAGTTGA 1044 0.4128 MDKRGAKVDGKKSAPPKNETQNLSRSLPSPWSTSTQAYHNVEHAATSNVNPATSLFYPSWSGSQMPTAYDAMYQSWSFSNIYPMAAAEVGQCCLLDSGDEMQRISCDKSLQPSIPKTNGEGLPRSVTSESKETTVVGHDVKNAGAATTFKIKESDETKERRKRQKNMISDKRKKRKIMKLQDIPSTRQGQSSMMQGNGPASQNVSSNETCNVIASDHFEANPTELQNQKLGTEPDACGSKPQLKRKETAEEKEQRRKHQKKIASKRSRMKIKIEREKIIDSLESLDDENAVLREELHARTIECERIEKENNALLAELIEQYGEETVMNLLKAQSTDSVAGGGQGSNS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1026 347 MobiDBLite consensus disorder prediction 15 33 - -
Gso11g1026 347 PANTHER G-BOX-BINDING FACTOR 1 11 335 - -
Gso11g1026 347 MobiDBLite consensus disorder prediction 151 206 - -
Gso11g1026 347 MobiDBLite consensus disorder prediction 109 133 - -
Gso11g1026 347 MobiDBLite consensus disorder prediction 226 267 - -
Gso11g1026 347 Coils Coil 275 295 - -
Gso11g1026 347 MobiDBLite consensus disorder prediction 1 33 - -
Gso11g1026 347 MobiDBLite consensus disorder prediction 109 134 - -
Gso11g1026 347 CDD bZIP 254 298 - -
Gso11g1026 347 MobiDBLite consensus disorder prediction 183 206 - -
Gso11g1026 347 PANTHER G-BOX-BINDING FACTOR 3-RELATED 11 335 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso11g1026 347 MobiDBLite consensus disorder prediction 239 257 - -
Gso11g1026 347 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 313 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1026 Gso-Chr11 9178694 9184345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1026 235 329 bZIP Transcription Factor Family AT4G36730 35.789 1.59e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g1026 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1026 - K23792 gmx:106795240 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0377 12 3310137 3317123 Gso11g1026 11 9178694 9184345 GST