Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0985 ATGGCTTGTTCAAGTGGAACATCTTCAGGGTCATTATCTCTGCTTCAGAACTCTGGTTCTGAGGAAGATTTGCAGGCGATGATGGAAGATCAGAGAAAGAGGAAGAGAATGATATCAAACCGCGAATCTGCACGCCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTTGTTTCCCAAGTGGCTCAGCTCAGAAAAGAGAACCAACAAATACTCACAAGCGTCAACATCACCACGCAACAGTACTTAAGCGTTGAGGCTGAGAACTCGGTGCTTAGGGCTCAGGTGGGTGAGTTGAGTCACAGGTTGGAGTCTCTGAACGAGATCGTTGACGTGTTGAATGCCACCACCACTGTGGCGGGTTTTGGAGCAGCAGCATCGAGCACCTTCGTTGAGCCAATGAATAATAATAATAATAGCTTCTTCAACTTCAACCCGTTGAATATGGGGTATCTGAACCAGCCTATTATGGCTTCTGCAGACATATTGCAGTATTGA 501 0.4691 MACSSGTSSGSLSLLQNSGSEEDLQAMMEDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTTVAGFGAAASSTFVEPMNNNNNSFFNFNPLNMGYLNQPIMASADILQY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0985 166 SUPERFAMILY Leucine zipper domain 32 84 IPR046347 GO:0003700|GO:0006355
Gso11g0985 166 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 164 - -
Gso11g0985 166 Coils Coil 48 75 - -
Gso11g0985 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Gso11g0985 166 CDD bZIP_plant_GBF1 33 83 IPR045314 GO:0003700|GO:0006355
Gso11g0985 166 MobiDBLite consensus disorder prediction 1 24 - -
Gso11g0985 166 MobiDBLite consensus disorder prediction 1 51 - -
Gso11g0985 166 PANTHER BZIP TRANSCRIPTION FACTOR 1 164 - -
Gso11g0985 166 Gene3D - 30 89 - -
Gso11g0985 166 MobiDBLite consensus disorder prediction 25 51 - -
Gso11g0985 166 Pfam bZIP transcription factor 31 77 IPR004827 GO:0003700|GO:0006355
Gso11g0985 166 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 93 IPR004827 GO:0003700|GO:0006355
Gso11g0985 166 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0985 Gso-Chr11 8796893 8798755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0985 25 166 bZIP Transcription Factor Family AT4G34590 55.944 2.13e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g0985 bZIP_1 3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0985 K25786 - gmx:547956 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0336 12 2982769 2984238 Gso11g0985 11 8796893 8798755 GST