Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0943 ATGGGAGAAAATGAAGAAGCTACGACGACTGACATGTTGCAGAGGCTTCACTTTCTGAAGCAGCCGTTAAACATGGAGCAACTTAGCATCCCGCAATTCAACCCCTCGCAAATGCGCGCGAGGCATCATCATCAGAATCAGAACCAGTTCGACGGTGGGAACAGTAACAAGCGCGCCGGTATACCACCCTCGCACCCACACCAGATCCCACCCATTTCGCCGTACTCTCAGATCCCATTGTCGCGTCAGCACAGCAACATCAACAGCAACAGCAACATTTCCCCTACACCCACCCACACCCGATCACTCTCGCAGCCCTCGTTTTTCTCCCTCGACTCCCTCCCTCCACTTAGCCCCTCTCCCTTCCGTGACTCCTCCTCGACTTCCGTGTCCGAAGCTGCTGACGTGTCCATGGAAGATCGCGACGTGAGTTCTCATTCCCTGTTGCCACCCTCACCTTTCTCCAGAACACTCAACACCAACAACAGTAATTTACCATTACCTCCTCGGAAAGCGCATAGACGCTCTAACAGTGATATTCCGTTTGGGTTTTCCACCGTTTTGCAATCTTCTCCGCCGCTTATCCCTCTTCGGAACCCCGTTTCAGCGAAACCTGCTCAGTTGGTGAAACGGGAAACACCGTGGGACAGGGTTGTTGAGCATAATACTAATACTAATAATAATAATAATGTAGAGGGATCCGGGGAGAAGAAATCTCCTGAAGGGGAAGTGGTGGATGATCTTTTCTCTGCTTACATGAATTTGGATAGCTTTGATGCTTTGAACTCTTCTGGAACCGATGATAAAAATGGAGGCGAAAATCGCGATGATTTGGATAGTAGAGCCAGTGGAACTAAGACCAATGGTGGAGACAGTAGTGATAATGAAGCTGAGAGTAGTGTTAATGAGAGTGGGCATGGAGGGAGTGAGAAGAGGGAAGGGATGAAAAGGAGTGCTGGGGGTGAGATTGCACCAACTACAAGGCACTATAGGAGTGTCTCCATGGATAGTTTCATTGGGAAGTTGAATTTCGGTGACGAGTCGCCGAAGCTGCCTCCTTCGCCGGGGCAGAGAGGTGGTTTGATGTCGCCTGCGGGTGGAATTGATGGGAATTCGGCGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTTAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAGCTTGCGGAGATTGCCTTGACCGATCCAAAGCGTGCGAAAAGGATTTTGGCCAACCGGCAATCGGCTGCGCGATCCAAAGAGCGAAAGATGCGGTACATTTCGGAGCTAGAACACAAGGTTCAGACTCTACAGACAGAAGCCACCACACTATCTGCACAGCTTACTCTGTTACAGAGAGATTCTGCTGGACTCACTAACCAGAATAGCGAGTTGAAGTTTCGCCTTCAATCTATGGAACAGCAAGCAAAGCTCCGAGATGCTCTAAATGAGGCTCTTACTGCTGAAGTTCAAAGATTAAAGATTGCTACAGCTGAACTAAGTAGCGATTCGCATGGTTCTAGCTGTTTGATTCCTCAACATTCTGTCAACCCTCTGATGTTCCAGCAGCAGCCTCCTTCTGCATCCCAACAAAACATTCATCTTCAACAGCAGCAGCACCGCCAGAATGGTAATGCCAACTCAAATTCTGACTTAAAACAATAG 1674 0.4898 MGENEEATTTDMLQRLHFLKQPLNMEQLSIPQFNPSQMRARHHHQNQNQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPLSRQHSNINSNSNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVSSHSLLPPSPFSRTLNTNNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRNPVSAKPAQLVKRETPWDRVVEHNTNTNNNNNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGGENRDDLDSRASGTKTNGGDSSDNEAESSVNESGHGGSEKREGMKRSAGGEIAPTTRHYRSVSMDSFIGKLNFGDESPKLPPSPGQRGGLMSPAGGIDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELSSDSHGSSCLIPQHSVNPLMFQQQPPSASQQNIHLQQQQHRQNGNANSNSDLKQ* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0943 557 MobiDBLite consensus disorder prediction 190 241 - -
Gso11g0943 557 MobiDBLite consensus disorder prediction 523 557 - -
Gso11g0943 557 Coils Coil 423 478 - -
Gso11g0943 557 SUPERFAMILY Leucine zipper domain 407 458 IPR046347 GO:0003700|GO:0006355
Gso11g0943 557 MobiDBLite consensus disorder prediction 148 167 - -
Gso11g0943 557 Gene3D - 406 459 - -
Gso11g0943 557 MobiDBLite consensus disorder prediction 37 55 - -
Gso11g0943 557 CDD bZIP_plant_RF2 408 459 IPR044759 GO:0003700|GO:0006355
Gso11g0943 557 MobiDBLite consensus disorder prediction 219 235 - -
Gso11g0943 557 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 74 552 - -
Gso11g0943 557 MobiDBLite consensus disorder prediction 37 178 - -
Gso11g0943 557 MobiDBLite consensus disorder prediction 74 134 - -
Gso11g0943 557 Pfam bZIP transcription factor 407 465 IPR004827 GO:0003700|GO:0006355
Gso11g0943 557 Coils Coil 486 506 - -
Gso11g0943 557 MobiDBLite consensus disorder prediction 283 304 - -
Gso11g0943 557 MobiDBLite consensus disorder prediction 262 329 - -
Gso11g0943 557 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 405 468 IPR004827 GO:0003700|GO:0006355
Gso11g0943 557 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 74 552 - -
Gso11g0943 557 SMART brlzneu 403 467 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0943 Gso-Chr11 8451759 8455809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0943 1 526 bZIP Transcription Factor Family AT4G38900 56.483 3.34e-175 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g0943 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0943 - - gmx:778145 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0302 12 2672449 2676968 Gso11g0943 11 8451759 8455809 GST