LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso11g0943	ATGGGAGAAAATGAAGAAGCTACGACGACTGACATGTTGCAGAGGCTTCACTTTCTGAAGCAGCCGTTAAACATGGAGCAACTTAGCATCCCGCAATTCAACCCCTCGCAAATGCGCGCGAGGCATCATCATCAGAATCAGAACCAGTTCGACGGTGGGAACAGTAACAAGCGCGCCGGTATACCACCCTCGCACCCACACCAGATCCCACCCATTTCGCCGTACTCTCAGATCCCATTGTCGCGTCAGCACAGCAACATCAACAGCAACAGCAACATTTCCCCTACACCCACCCACACCCGATCACTCTCGCAGCCCTCGTTTTTCTCCCTCGACTCCCTCCCTCCACTTAGCCCCTCTCCCTTCCGTGACTCCTCCTCGACTTCCGTGTCCGAAGCTGCTGACGTGTCCATGGAAGATCGCGACGTGAGTTCTCATTCCCTGTTGCCACCCTCACCTTTCTCCAGAACACTCAACACCAACAACAGTAATTTACCATTACCTCCTCGGAAAGCGCATAGACGCTCTAACAGTGATATTCCGTTTGGGTTTTCCACCGTTTTGCAATCTTCTCCGCCGCTTATCCCTCTTCGGAACCCCGTTTCAGCGAAACCTGCTCAGTTGGTGAAACGGGAAACACCGTGGGACAGGGTTGTTGAGCATAATACTAATACTAATAATAATAATAATGTAGAGGGATCCGGGGAGAAGAAATCTCCTGAAGGGGAAGTGGTGGATGATCTTTTCTCTGCTTACATGAATTTGGATAGCTTTGATGCTTTGAACTCTTCTGGAACCGATGATAAAAATGGAGGCGAAAATCGCGATGATTTGGATAGTAGAGCCAGTGGAACTAAGACCAATGGTGGAGACAGTAGTGATAATGAAGCTGAGAGTAGTGTTAATGAGAGTGGGCATGGAGGGAGTGAGAAGAGGGAAGGGATGAAAAGGAGTGCTGGGGGTGAGATTGCACCAACTACAAGGCACTATAGGAGTGTCTCCATGGATAGTTTCATTGGGAAGTTGAATTTCGGTGACGAGTCGCCGAAGCTGCCTCCTTCGCCGGGGCAGAGAGGTGGTTTGATGTCGCCTGCGGGTGGAATTGATGGGAATTCGGCGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTTAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAGCTTGCGGAGATTGCCTTGACCGATCCAAAGCGTGCGAAAAGGATTTTGGCCAACCGGCAATCGGCTGCGCGATCCAAAGAGCGAAAGATGCGGTACATTTCGGAGCTAGAACACAAGGTTCAGACTCTACAGACAGAAGCCACCACACTATCTGCACAGCTTACTCTGTTACAGAGAGATTCTGCTGGACTCACTAACCAGAATAGCGAGTTGAAGTTTCGCCTTCAATCTATGGAACAGCAAGCAAAGCTCCGAGATGCTCTAAATGAGGCTCTTACTGCTGAAGTTCAAAGATTAAAGATTGCTACAGCTGAACTAAGTAGCGATTCGCATGGTTCTAGCTGTTTGATTCCTCAACATTCTGTCAACCCTCTGATGTTCCAGCAGCAGCCTCCTTCTGCATCCCAACAAAACATTCATCTTCAACAGCAGCAGCACCGCCAGAATGGTAATGCCAACTCAAATTCTGACTTAAAACAATAG	1674	0.4898	MGENEEATTTDMLQRLHFLKQPLNMEQLSIPQFNPSQMRARHHHQNQNQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPLSRQHSNINSNSNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVSSHSLLPPSPFSRTLNTNNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRNPVSAKPAQLVKRETPWDRVVEHNTNTNNNNNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGGENRDDLDSRASGTKTNGGDSSDNEAESSVNESGHGGSEKREGMKRSAGGEIAPTTRHYRSVSMDSFIGKLNFGDESPKLPPSPGQRGGLMSPAGGIDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELSSDSHGSSCLIPQHSVNPLMFQQQPPSASQQNIHLQQQQHRQNGNANSNSDLKQ*	558

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso11g0943	557	MobiDBLite	consensus disorder prediction	190	241	-	-
Gso11g0943	557	MobiDBLite	consensus disorder prediction	523	557	-	-
Gso11g0943	557	Coils	Coil	423	478	-	-
Gso11g0943	557	SUPERFAMILY	Leucine zipper domain	407	458	IPR046347	GO:0003700\|GO:0006355
Gso11g0943	557	MobiDBLite	consensus disorder prediction	148	167	-	-
Gso11g0943	557	Gene3D	-	406	459	-	-
Gso11g0943	557	MobiDBLite	consensus disorder prediction	37	55	-	-
Gso11g0943	557	CDD	bZIP_plant_RF2	408	459	IPR044759	GO:0003700\|GO:0006355
Gso11g0943	557	MobiDBLite	consensus disorder prediction	219	235	-	-
Gso11g0943	557	PANTHER	ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	74	552	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso11g0943	Gso-Chr11	8451759	8455809	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso11g0943	1	526	bZIP Transcription Factor Family	AT4G38900	56.483	3.34e-175	504

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Gso11g0943		bZIP_1	2e-09	CL0018

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso11g0943	-		-	gmx:778145	966.066

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso12g0302	12	2672449	2676968	Gso11g0943	11	8451759	8455809	GST

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