Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0937 ATGAACGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTGCTTGTTCATCTTGCATGCATCCTAACCGAGCTCTCATGGGGTCAAAGGCTGAAGAATTCTCTGATGAAAACTGTCGCTTAGGGGAGGTTAATCAGTATTGTGATGAGAGTGATAGATCTTCTCTTGGGAGCAGAGCTTGTGAAAGGTTGAAGCATGGTGTCAGTGAAACCAGTCACAAGCCTAGTGTTTCTTCCACTCATGATTCTCTATCTGAAAATGCTGAGAACAGTCAAGCCTTATCAGAGAAGTATCAGGATTCCAAGTGTTTAGAAAGTCTTGATGATAGCACTTCTTGTATTAGTAGGACCAGTAATGCTAATTTAGCGAGCAGTTGCCATCAGATAAATACAGACAGAATAAATATATCTTGTAGTTCAACTTCAGTTAGTCACTTAGTGGCAGAAGGATCTGGAAATGGGCCAACTGTTGACATATCTAGTTTGTCAGAATGTTGTATGGAAAATGTTGATTCATCATTGACCAAAGAGAGAGTACCTATTATTGTTCCTGGTGAAAAATCTCTGGCAGATAAGGAAAACCTAAATAATGGTACAGCCAAGGTTTCAATTGAAATATGTCCAAAGTCAGAAGAAGATACTGAAAATAATGTTGATGTTGCGGAAGATGATGATCATAAATATTCAGCCCATGATGGATTGCATGAGAAGGTTGAGGAGCTGATTAAATCATCTGGAAGGGCTGAACCTCAATCAGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTATTGCATGCGGGAAATGCTTGAGAAGGTCCCTGAAGGGGACTGGTTATGTGAAGAATGCAAGTGTGCAGAGGAGACTGCAAATCGAAAGCTAGATATTGAAGAAAAAAAAAATCACAAAGTTAGTTCAACTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACGGGATCACCAAAGGCATCAAGCCCTAAGAGAATAGTCCCACTGTCGCGGGAATCTTCATTCAAGAGCATGGATAAAGAAAAGATGAAATCTGGTCAACAGAAGATCCCCATGCATAACCACCTCGGTGGCGATGACACAGAACTTGCCCGTTCTCTATCAGCTGGCCCTCGGAGTCAAAATGCAAGGAGTACATTGCTGAAGTCTAATTCATTCAACAACAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGTTGTTGAACATATTTCTAAGAATATGGAGACACCTGCTGGGATGATAAGCAAATCAATGTCATTCAAATTGTCGAATTTGGGTCGTTCAAATGCTGTTGAATCAAAAGTGAAAATGATCTCTTCTAAGCCTGGAACGACACAGGATTTGAAAGCATCAAGACATGCAAAAGATTCTGCTTCATTTGACAGGAAATTTCTGTCTAAGATTGATCGACCTGTCATTTGTTCAACCATGGTTAGTTCTGTTGTTTCCACATCAAAGGGTGATCCGAAGCTTACACCACATGGCGAAACTGCTAAACCTTCTACAGTTAACAACAATAGAGAGTTTAAGGTCAACCAAGATGGAAAATTATATTCATTATCGAAGTCTATGAATAATACTAGCAGTAAAAGTCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACAAGTGTCGATGAAACTCAACAGGATAAGCTGCCTCGATCACAGGATACAGCTAATCAGGTTGACAAAGCCAAAGATAGTTCCATTGATCATGTGATGTCAGGTGTTACTAATGCTTCAAAAAGCTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGTACAGTTAGTGGTACGCAGGAATTTGGTGCCGAATCATCAGTCATTGCCACAAGTAGTTCAAAAGAGGAGATGCATGAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAGGAAAGAAGCTCCGGATCAAACTAATGAGTTTCCTACATCAAGCACTGGTTTGAAACGCGAAGTCACTTCTCAAAAGCAAGTGTTGGTTTCCAGTACATTGAAGAATAGTATATCTGCTGAAGAAAGCAATATGAAGCAGGAAATCATTGTGAATTCTACAGTTGAAACCTCCAAATGTCCATCTGCCAATGATCTGAAGCAAGTTAAATTTTGTCGAACTGATTTTTGCTCTCAGCTGAGAAAGTCAGATTCTGTTGGTCCCACTTCTGGAAAGCCTGTAGTGAGAGACTTGCCCAATAATGCCATGGAAATATCAAGTATTCTTTCAAAGATGTCAGTCATTCCAGAATATGAGTACATCTGGCAGGGTGTCTTTAAAGTGCATAGAAATGGAATGCCTCCTGACTTGTATACTGGGATTCAAGCACATTTATCTGCATGTGCTTCCCCTAAGGTTCATGAGGTAGTGAAGAAATTTTTACCTGAAGTTTCACTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAGGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTATGAGAGGTATTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTAGGGGGACTTCTGATGGTGTTGAACTTCTTATATTTGCATCTAATCAGCTTCCAGAAGATTCACAACGTTGGAATATGTTATTTTTCCTATGGGGTATATTTAGGGGGAGGAGGATCAATCACTTAGATTCCACAAAAAAGATATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAAGATTTTCCAACAGCTGTCATGACTTTGTCTGAAACTCGGTGTTCACCTAAGCGCATGGATGAAGAGTTCATTGACCAAGATCACAATATGGTAAGTAGGAATTTTGATGGCAAAGAAACTATTTTTGACCAGACACATTTGGGTTTACTAGTAAACTTAGAGAGACAAGACGCTAGAATCAACACCAAATCTACATCAGGGATTCCAACCATCAGGACACAATTGTGTCAACAAATGAATTCCACTGGTTCGTCCCTGAGAGATAGTGTTCCAGAGCATCGACAATACATAGAGTCTAAACCTCCTGAAGCAATGGAAACTAGTGTAAGTAGTAGGATTGTGGAAACAAAAACTAATCATGATATTTCTGTTAAGCAAGAGAACTCTTTGTCTTCGGGGATCCCTTCGGTTGGTTACCAAGAGATAGATACTGCAAGCAATATCAATAGGGATAAAATTTTGGACAGAACAAACAATGATGAGAATCAGCAAAGGCCTAAAAGGAAACAGATGGAAGATGATCTTGATATTAACGTTGAGGCAACGTTTCTGGGAGACCTGACTGTGAAAGCGGTCAACTGTCAACTACCTAATGATAAAAAAGTTAAGCATATAGATCTTTCAGATACAGCTGTGGAAGCTTCTGCAGTTAGTTGTCAGAAAATGCCTTGGAATGAGGTAAATGGAAAATTTGAAAACGGAGAAAGTTATAGCAAGAAGCTGCAAACAGGTTTTGGTGGAATTCACGGATGTTATGATTCTGGAGCCAGGGAATCTTTTAATGGTAGTTTTGCGTCACTTGTAAATGATCTTGGTTCCTGTTCTTCAGGGGAGAACAAACGGTGCAAAAAACCTTGTGATGAGAAAATCATCCACGAGGACTTAGGAGCGATGGAAAGAACCTTCTTTCCTGTTGATACTCGTAAAAAAAAAGACTCGGGGATGGTACTGAATGAGCCTCGTGCATACGTGGACCAATTTCAAGTTGGAATTCCAAATCTAGAGCTTGGTTTGGGGGGTGAAACGAAACCGTCACACAAGGGTATGCTGCCTTTCTTTGTTGGTGCGGTTGACAAGAAAAATAGCCAGGAAAAGACTCCAGATATATTGACAGATGAGCGAGAGGATGAGAATGTTGCTGCGTCTCTTTCCCTGTCTCTATCTTTTCCATCTTCAAACAAGGAACACGTCAAACCTGTTACAAAAGCTGAGGATGGGCATAATGTGAATTCGCCGTATCTCCTTTTTGGGAGATTCACGGACAAATAA 4230 0.4021 MNADMRLESGTCNVCSAACSSCMHPNRALMGSKAEEFSDENCRLGEVNQYCDESDRSSLGSRACERLKHGVSETSHKPSVSSTHDSLSENAENSQALSEKYQDSKCLESLDDSTSCISRTSNANLASSCHQINTDRINISCSSTSVSHLVAEGSGNGPTVDISSLSECCMENVDSSLTKERVPIIVPGEKSLADKENLNNGTAKVSIEICPKSEEDTENNVDVAEDDDHKYSAHDGLHEKVEELIKSSGRAEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEETANRKLDIEEKKNHKVSSTSQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVPLSRESSFKSMDKEKMKSGQQKIPMHNHLGGDDTELARSLSAGPRSQNARSTLLKSNSFNNNSKPRVKLVDEVVPQKQKGVVEHISKNMETPAGMISKSMSFKLSNLGRSNAVESKVKMISSKPGTTQDLKASRHAKDSASFDRKFLSKIDRPVICSTMVSSVVSTSKGDPKLTPHGETAKPSTVNNNREFKVNQDGKLYSLSKSMNNTSSKSPEPQVSSDRTSTSVDETQQDKLPRSQDTANQVDKAKDSSIDHVMSGVTNASKSSFCRKCKDFGHATECCTVSGTQEFGAESSVIATSSSKEEMHEGNRLKAAIQAALLRRPEIHKRKEAPDQTNEFPTSSTGLKREVTSQKQVLVSSTLKNSISAEESNMKQEIIVNSTVETSKCPSANDLKQVKFCRTDFCSQLRKSDSVGPTSGKPVVRDLPNNAMEISSILSKMSVIPEYEYIWQGVFKVHRNGMPPDLYTGIQAHLSACASPKVHEVVKKFLPEVSLNEVSRLSIWPSQFHQGGAKEDNIALYFFAKDIESYERYYKGLLDHMIRNDLALRGTSDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRINHLDSTKKICIPSLNVMPNEKDFPTAVMTLSETRCSPKRMDEEFIDQDHNMVSRNFDGKETIFDQTHLGLLVNLERQDARINTKSTSGIPTIRTQLCQQMNSTGSSLRDSVPEHRQYIESKPPEAMETSVSSRIVETKTNHDISVKQENSLSSGIPSVGYQEIDTASNINRDKILDRTNNDENQQRPKRKQMEDDLDINVEATFLGDLTVKAVNCQLPNDKKVKHIDLSDTAVEASAVSCQKMPWNEVNGKFENGESYSKKLQTGFGGIHGCYDSGARESFNGSFASLVNDLGSCSSGENKRCKKPCDEKIIHEDLGAMERTFFPVDTRKKKDSGMVLNEPRAYVDQFQVGIPNLELGLGGETKPSHKGMLPFFVGAVDKKNSQEKTPDILTDEREDENVAASLSLSLSFPSSNKEHVKPVTKAEDGHNVNSPYLLFGRFTDK* 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0937 1409 MobiDBLite consensus disorder prediction 559 622 - -
Gso11g0937 1409 MobiDBLite consensus disorder prediction 387 401 - -
Gso11g0937 1409 MobiDBLite consensus disorder prediction 331 442 - -
Gso11g0937 1409 SMART PHD_3 271 318 IPR001965 -
Gso11g0937 1409 MobiDBLite consensus disorder prediction 420 442 - -
Gso11g0937 1409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 203 333 IPR013083 -
Gso11g0937 1409 MobiDBLite consensus disorder prediction 74 94 - -
Gso11g0937 1409 MobiDBLite consensus disorder prediction 542 633 - -
Gso11g0937 1409 ProSiteProfiles Zinc finger PHD-type profile. 269 320 IPR019787 -
Gso11g0937 1409 SUPERFAMILY FYVE/PHD zinc finger 258 323 IPR011011 -
Gso11g0937 1409 MobiDBLite consensus disorder prediction 69 94 - -
Gso11g0937 1409 PANTHER - 1164 1399 - -
Gso11g0937 1409 PANTHER - 5 1163 - -
Gso11g0937 1409 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1164 1399 - -
Gso11g0937 1409 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 5 1163 - -
Gso11g0937 1409 MobiDBLite consensus disorder prediction 339 374 - -
Gso11g0937 1409 MobiDBLite consensus disorder prediction 1137 1159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0937 Gso-Chr11 8405916 8413504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0937 268 329 C2H2 Transcription Factor Family AT3G01460 35.484 8.34e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0937 - - gmx:100784908 2775.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0128 12 1082835 1091283 Gso11g0937 11 8405916 8413504 GST