Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0921 ATGGACGACGGCGAGCTGGATTTCTCGAACCATGAAGTGTTTTCGAGTCCGAACATGGGGGAGCTTCCGAGCAGCGGTTCAATGGACAGTTTCTTCGACGAGCTTCTCAAGGACACGCACGCGTGCACCCACACCCACACGTGCAACCCTCCCGGCCCCGATTTCTCCCACACTCACACGTGCTACCACGTACACACCAAAATCGTCCCCGCCCCTGAGGAGGACCAGGTCGCTACTGATGACACCGCCGAGTCCGCCGAGAAAAAGTCGTCGTCGAAGAAGCGGCCTCTGGGGAACAAAGAAGCCGTCCGGAAGTACCGGGAGAAGAAGAAGGCGCGTGCGGCGTCGCTGGAGGATGAGGTTGTGAAGTTGAGGGCTCTGAACCAGCACTTGATGAAGAAGCTGCAGGGGCAGGCGGCTCTCGAGGCCGAAATAGCCAGGCTCAAGTGTTTGTTGGTTGACATAAGGGGGAGGATTGAAGGGGAAATTGGGTCCTTTCCCTATCAGAAAACAACAACAACAACGCCGAATCCGGTGGCTGGTTCTTATGTGATGAACCCTTGTAACTTGCCGTGTGATGATAGGGTGTATTGCCTTCACCCTGATGGGAGGATTGGGGAGACTGCGGCTTTGAATGGGGAAGAGTTTGATGGTTGTGAATTTGAGAACCTGCAGTGTCTGGCAAGCCAGAATTTGGGGCTCAAGGATCTTCGCGCTTGTGGGGTTGGGGTTGGACACACAGGGTCTAATGTAAATTCTTCTGCCTTATCAAAGAAAAGAAAAGGGGGATCTCGTGCTGCAACAGCTGGTTGA 813 0.5437 MDDGELDFSNHEVFSSPNMGELPSSGSMDSFFDELLKDTHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAPEEDQVATDDTAESAEKKSSSKKRPLGNKEAVRKYREKKKARAASLEDEVVKLRALNQHLMKKLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKTTTTTPNPVAGSYVMNPCNLPCDDRVYCLHPDGRIGETAALNGEEFDGCEFENLQCLASQNLGLKDLRACGVGVGHTGSNVNSSALSKKRKGGSRAATAG* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0921 270 Coils Coil 100 134 - -
Gso11g0921 270 MobiDBLite consensus disorder prediction 81 105 - -
Gso11g0921 270 CDD bZIP 95 146 - -
Gso11g0921 270 SUPERFAMILY Leucine zipper domain 94 137 IPR046347 GO:0003700|GO:0006355
Gso11g0921 270 SMART brlzneu 87 154 IPR004827 GO:0003700|GO:0006355
Gso11g0921 270 MobiDBLite consensus disorder prediction 251 270 - -
Gso11g0921 270 PANTHER BASIC LEUCINE ZIPPER 23 1 238 - -
Gso11g0921 270 MobiDBLite consensus disorder prediction 72 109 - -
Gso11g0921 270 MobiDBLite consensus disorder prediction 11 25 - -
Gso11g0921 270 MobiDBLite consensus disorder prediction 1 27 - -
Gso11g0921 270 Gene3D - 79 155 - -
Gso11g0921 270 Pfam Basic region leucine zipper 90 144 IPR004827 GO:0003700|GO:0006355
Gso11g0921 270 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0921 Gso-Chr11 8282572 8285408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0921 1 269 bZIP Transcription Factor Family AT2G16770 63.100 2.39e-111 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g0921 bZIP_2 5.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0921 K25785 - gmx:778149 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0280 12 2516389 2520077 Gso11g0921 11 8282572 8285408 GST