Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0920 ATGACAGTTGAAAAGAGAATTGTTTTGGTGGGGATTAGAATTGATGGCTATAGCAGACAGCTCCTCAACTGGGCTCTTGTCAAAGTTGCTGAGCCTGGTGATTGTGTTATAGCAGTTCATGTGGTTAAAAATTCAGATTATGTTTCCAAAAACAAGACTCTGATAGATGGCTATTTAGAAGTTTATGATGGCCTATGTGGTGTGAAGAAGGTAGGTCTCACTGGTCAAATCTTCACAGGAAGCTCCATTAAAAACATTCTTGTCAGAGAAGCAAAAAAACATGCTGCTCTGGCTCTAGTGGTAGGGGGACGAGCTGCCACAGCTAAATATTGTGCTAAACGGCTACCACCGACCACCAATGTTCTAGCCATTCAAGACTCAAGAATTCTCTTCAGAAGTTGCACCAATAAACAACTACCAGGTGGTCTTATACTGGATCCAAGACCTAGTTTAACAATCATCGAAGAAAACTTGAGTGACAGAATAATCCAGTCTGCAATTTGTGACTCCATCATGGAGATTGAGGAATCAACACCCATAAAAAATTCCTTAGAATTGAAGGATGAAGAGAAGAGCAAGTCAACAAGGTCAATATCAGTTGAGCAGAAGCTTGGGTGGCCTCTACTCCGCAGAGCCAATTCAGGAATGTCACAAACCCTTCTTCATACAAGGGACATGTCAGTAGTACAATGGGTAATGACCTTACCAGATCGTTCACCACATAATAAAAGTTCTAGCTCTTCTTCCACTGAGGAAAATCCATTTGAAAGGAGGAGCATCAGCGATATTGAATATGAGAGCTCTACAAATTCTTCTCCTGCATCTGTTGATATAATACCAAATGGCCTAGAGGAGATATTAAATTTAAATTCTCTCGATTGCAAGCGATTCAGCCTTGAGGTTCTCAAGTCTTGCACTAGCCAATTCTCTTCAGAAAACTTGGTTGGGAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTCCTCCCTGATGGAAAGGCAATCGCAGTTAAAGTAATGCAGTCATCAAAAGAAGCCTGGAAAGATTTTGCCCTTGAGGTGGAAATAATATCCTCAGTGGAGCACAAAAGCATTGCCCCTCTACTTGGAATTTGCATAGAGAACAATTCTTTAATATCTGTTTACGATTATTTCCCCAAAGGCAGCTTAGAGGAAAATCTGCATGGAAAGAACAAGGATGAATCCATCTTGTCATGGGAAGTGAGATTTAATGTGGCTCTTAGGATCGCTGAAGCCCTCGATTACCTACACAGGGAAGCTTTGAAGCCTGTTGTTATACATAAAGATGTCAAGTCTTCTAACATTCTTCTCTCCCAAGGGTTTGAACCTCAGTTGTCTGATTTCGGACTAGCAGTATGGGGTCCAACAACTTCATCCTTTTTGACCCAAGATGTAGTAGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTCTATGCCTTCGGTGTAGTTCTACTTGAGCTAATATCAGGAAGGGAACCAATCAGCTCAGCAGCTTTCAAAGGACAGGAGAGCTTGGTCGTGTGGGCGAAACCAATAATGGAGAGTGGGAATGTTAAGGGCTTATTGGACCCAAATTTAGAAGGGAAATTTGTTGAGGCCCAATTGCAAAGAATGGTTCTAGCAGCATCTTTATGCATCACACGGGCGGCTAGACTTCGTCCTAAACTGAACCAGATATTGAAGATCCTAAAAGGAGATGAGAGAGTTGAATGTTTCTTAAACTCTCAAGGGGATGGTGATCAGGAGGATTCAGAAAATCAAGAAAACATTGATGACGAAGTGTACCCAAATTCAAGTGCAGAGTTGCACCTAAGTCTTGCATTACTTGGTGTTGACGATGACAGTACATCACATAGTAGTACAGACCACAGCTATAGTGAACACTTGAAAGAACAATGGAGCAGGTCATCAAGTTTTAATTAG 1974 0.4154 MTVEKRIVLVGIRIDGYSRQLLNWALVKVAEPGDCVIAVHVVKNSDYVSKNKTLIDGYLEVYDGLCGVKKVGLTGQIFTGSSIKNILVREAKKHAALALVVGGRAATAKYCAKRLPPTTNVLAIQDSRILFRSCTNKQLPGGLILDPRPSLTIIEENLSDRIIQSAICDSIMEIEESTPIKNSLELKDEEKSKSTRSISVEQKLGWPLLRRANSGMSQTLLHTRDMSVVQWVMTLPDRSPHNKSSSSSSTEENPFERRSISDIEYESSTNSSPASVDIIPNGLEEILNLNSLDCKRFSLEVLKSCTSQFSSENLVGKGGSNRVYKGVLPDGKAIAVKVMQSSKEAWKDFALEVEIISSVEHKSIAPLLGICIENNSLISVYDYFPKGSLEENLHGKNKDESILSWEVRFNVALRIAEALDYLHREALKPVVIHKDVKSSNILLSQGFEPQLSDFGLAVWGPTTSSFLTQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSAAFKGQESLVVWAKPIMESGNVKGLLDPNLEGKFVEAQLQRMVLAASLCITRAARLRPKLNQILKILKGDERVECFLNSQGDGDQEDSENQENIDDEVYPNSSAELHLSLALLGVDDDSTSHSSTDHSYSEHLKEQWSRSSSFN* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0920 657 Gene3D Phosphorylase Kinase; domain 1 281 383 - -
Gso11g0920 657 ProSiteProfiles Protein kinase domain profile. 309 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0920 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Gso11g0920 657 MobiDBLite consensus disorder prediction 237 257 - -
Gso11g0920 657 MobiDBLite consensus disorder prediction 630 657 - -
Gso11g0920 657 MobiDBLite consensus disorder prediction 237 254 - -
Gso11g0920 657 SMART serkin_6 309 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0920 657 MobiDBLite consensus disorder prediction 633 647 - -
Gso11g0920 657 Gene3D Transferase(Phosphotransferase) domain 1 384 593 - -
Gso11g0920 657 SUPERFAMILY Protein kinase-like (PK-like) 292 580 IPR011009 -
Gso11g0920 657 PANTHER OS01G0253100 PROTEIN 5 648 IPR045271 GO:0004714|GO:0006468
Gso11g0920 657 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 648 - -
Gso11g0920 657 CDD USP_Like 8 104 - -
Gso11g0920 657 Pfam Protein kinase domain 311 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0920 Gso-Chr11 8275618 8279463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0920 296 656 Trihelix Transcription Factor Family AT1G70460 38.606 2.09e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso11g0920 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0920 - - gmx:100780623 1265.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0279 12 2508206 2512203 Gso11g0920 11 8275618 8279463 GST