Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0905 ATGGGTACCACTACCACCTTTCCGCCTTCAGCCGTTTCAACCACCAGCAAATGGCTGGGCTTCGTGGCGGCCGTGTGGATTCAATGCATCTCCGGCAACAACTACACTTTCTCAAACTACTCCGACGCCCTCAAATCCCTCATGCACCTCACTCAGCTCCAACTCAACAACCTCTCCGTCGCTAAAGACGTTGGCAAAGCCTTTGGGCTTCTCGCGGGCCTGGCCTCCGACCGCTTCCCCACTTGGGCCATTCTCCTCATAGGCTCCGTCGAAGGCCTAATTGGCTACGGAACCCAATGGCTCGTTGTTAGCCAAAGAATTCAACCCCTCCCCTACTGGCAGATGTGTGTGTTTCTGTGCATGGGAGGGAACAGCACGACGTGGATGAACACTGCCGTTTTGGTAACATCCATTCGGAACTTCCGTTCAAACAGAGGACCCGTTTCGGGCATTCTGAAAGGCTTTGTAGGGTTGAGCACTGCGATATTCACTACTCTCTGTTCCGCTCTCTTCGCCGACGATCCTGGCTCCTTCCTCATCATGCTCTCTGTCATTCCCTTCGCAGTTTGCCTCACCGGTGTGTTTTTCCTCCGGGAGATTCTTCCCGTCGCCTCCGCCGACGCCGACGCCGAGGAGGTAAAGTATTTCGGCGTCTTCAACGTCGTGGCGGTGGCAATGGCGCTTTTTCTGTTGGCGTATGGGTTCATCCCCAGCCCCAGCATGTTGGTGTCAAGAGTGTTCGTGGCGGTTTTGGTTGTTATGCTGGTTTCGCCGTTGGGGATCCCGGTGTACTCGTACTTGAAGGGTAGCTTCGGAGAGGGGAATGACGTGGAGGGGCAGAGGGTGAAGGAGCCGTTGCTTCAGATTCCGGAGAAGGAGAACGAAGCTGTGGCGGCGGAGATAGTGAAGAGGGTGCCGGTGGTGGGTGAGGAGCACACGATAATGGAGGCGCTGAGAAGCGTGGATTTTTGGATCTTGTTCGTGTCGTTTCTGTGTGGGGTTGGAACGGGTTTGGCAGTGATGAACAATATGGGTCAAATCGGGTTGGCTCTCGGATACCCAGATGTCTCGCTCTTTGTGTCGCTTACAAGTATTTTCGGGTTTTTTGGACGGATCATCTCGGGTACTGTTTCGGAGTTCACCATCAAGAAAGCTGGAACACCTAGACCTCTTTGGAATGCAGCATCTCAGCTTCTAATGGCTGTAGGTTACATACTCCTGGCCATGGCTATGCCAGGTTCCCTATACATTGGGTCTATTTTAGTTGGCATGTGCTATGGAGTGAGGCTTGCCATTACAGTCCCAACAGCCTCAGAGTTATTTGGACTCAAATATTATGGTCTCATATACAACATTCTCATCCTTAACCTTCCCTTGGGTTCTTTCCTTTTCTCTGGTCTGCTTGCTGGCATACTCTATGATATGGAGGCAACTACAACAGAGGGAGGAGGCAACACGTGTGTTGGAGGTCATTGTTACAGGCTAGTCTTTGTTGTCATGACTGGAGCATGCATTGTTGGCTTCTTCTTAGACATTCTGTTGTCAATCAGAACCAAGAATATTTACACCAAGATTTCCATGAGCAAGAAATCCCTAGCAACATCCAATAGGCAGTGA 1617 0.5152 MGTTTTFPPSAVSTTSKWLGFVAAVWIQCISGNNYTFSNYSDALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLASDRFPTWAILLIGSVEGLIGYGTQWLVVSQRIQPLPYWQMCVFLCMGGNSTTWMNTAVLVTSIRNFRSNRGPVSGILKGFVGLSTAIFTTLCSALFADDPGSFLIMLSVIPFAVCLTGVFFLREILPVASADADAEEVKYFGVFNVVAVAMALFLLAYGFIPSPSMLVSRVFVAVLVVMLVSPLGIPVYSYLKGSFGEGNDVEGQRVKEPLLQIPEKENEAVAAEIVKRVPVVGEEHTIMEALRSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYPDVSLFVSLTSIFGFFGRIISGTVSEFTIKKAGTPRPLWNAASQLLMAVGYILLAMAMPGSLYIGSILVGMCYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFVVMTGACIVGFFLDILLSIRTKNIYTKISMSKKSLATSNRQ* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0905 538 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 11 534 - -
Gso11g0905 538 Pfam Nodulin-like 17 263 IPR010658 -
Gso11g0905 538 Gene3D MFS general substrate transporter like domains 281 520 IPR036259 -
Gso11g0905 538 CDD MFS_Mch1p_like 16 507 - -
Gso11g0905 538 Gene3D MFS general substrate transporter like domains 14 202 IPR036259 -
Gso11g0905 538 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 534 - -
Gso11g0905 538 SUPERFAMILY MFS general substrate transporter 33 521 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0905 Gso-Chr11 8129698 8133413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0905 17 531 Nodulin-like Gene Family AT4G34950 68.257 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0905 - - gmx:100800237 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0265 12 2357181 2361033 Gso11g0905 11 8129698 8133413 GST