Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0897 ATGGCGGCTACTGTGTCTTCTGCGTGGTCAAAGCCCGGCGCGTGGGCTCTCGATTCCGAGGAACACGAAGCCGAACTCCTTCAACAGAACAACGACAAGCCACTCGCCGACTTCCCCTCCCTCGCCGCCGCCGCTGCCAAGCCCAAGAAGAAGAAGGCCCAGACCTACTCCCTCGCCGAATTCACCGCCAAACCCGACACCTCCTTTGCCGACCAAGATCCCGTCGTCCTCCCCACCGGCCCCCGCCAGCGCACCGCCGAGGAGCTCGACCGCACCCGCCTCGGTGGCGGCTTCCGCAACTACGGCGACCGCCCCAACAGGAACAACTCCGGCGGCGGCGACGAGTCTTCCAATTCCCGCTGGGGTTCATCTAGGGTTTCTGACGAGCCCAGGAGAAATGGTTTTGGGGCTAGGGATTCCAATCGGGAGCTTCCCCCTTCGCGCGCTGACGAAACTGATAATTGGGCTGCGTCGAAGAAACCCTCTGGAGGAGGGTTTGAGAGGAGGGAGAGGGACAAAGGAGGGTTTTTCGATTCGCAGTCTCGTGCGGATGAATCTGATAGTTGGGTTTCGAATAAGAGCTTTGTGCCGTCGGAGGGGCGGAGATTCAGCTCCAACGGCGGCGGAGAGAGGAGGGTTGTTGGATTCGGCTCCAGCGGCGGCGCGGATTCCGACAATTGGAACAATAAGAAGAAGAGTGAGTCCAACATTGGTAGCAGCGAGAGTGTTGGTGTTGGTGGGAGGCCGAAGCTTGTGTTGCAACCTCGGACACTGTCGGTGAGCAATGAAGGGGATAATGTGGGGAAGCCTAAAGGGGTTAATCCGTTCGGAGAGGCGAGGCCGAGGGAGCAGGTTTTGGCGGAGAAAGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCGTCAAGATTAAGGAGACAAGTGGTGGTGGTGGTGATGGGTTTGGAAAGAGGGGTTTTGGGTCCTCCAACGGTGGTGGTGGAGGACGTGCTATTTTGCCTGAAAGTCGCACTGAGAGGAGTTGGAGGAAGCCCCAATCTGATGATGATCGCCCTAAAAGTGCTGAGAAAGTGGAAAATGAACCTGATCAAAAAAAGGAAGTGGAAGATGAACACGTTGAGGAAAATTGA 1134 0.5705 MAATVSSAWSKPGAWALDSEEHEAELLQQNNDKPLADFPSLAAAAAKPKKKKAQTYSLAEFTAKPDTSFADQDPVVLPTGPRQRTAEELDRTRLGGGFRNYGDRPNRNNSGGGDESSNSRWGSSRVSDEPRRNGFGARDSNRELPPSRADETDNWAASKKPSGGGFERRERDKGGFFDSQSRADESDSWVSNKSFVPSEGRRFSSNGGGERRVVGFGSSGGADSDNWNNKKKSESNIGSSESVGVGGRPKLVLQPRTLSVSNEGDNVGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESVKIKETSGGGGDGFGKRGFGSSNGGGGGRAILPESRTERSWRKPQSDDDRPKSAEKVENEPDQKKEVEDEHVEEN* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0897 377 MobiDBLite consensus disorder prediction 125 155 - -
Gso11g0897 377 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 360 IPR010433 GO:0003743
Gso11g0897 377 MobiDBLite consensus disorder prediction 221 242 - -
Gso11g0897 377 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 360 - -
Gso11g0897 377 MobiDBLite consensus disorder prediction 282 304 - -
Gso11g0897 377 MobiDBLite consensus disorder prediction 163 180 - -
Gso11g0897 377 MobiDBLite consensus disorder prediction 1 33 - -
Gso11g0897 377 MobiDBLite consensus disorder prediction 61 377 - -
Gso11g0897 377 MobiDBLite consensus disorder prediction 337 377 - -
Gso11g0897 377 MobiDBLite consensus disorder prediction 103 124 - -
Gso11g0897 377 MobiDBLite consensus disorder prediction 181 201 - -
Gso11g0897 377 Pfam Plant specific eukaryotic initiation factor 4B 6 305 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0897 Gso-Chr11 8047715 8050155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0897 1 345 Eukaryotic Initiation Factors Gene Family AT4G38710 51.385 2.06e-64 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0897 - - gmx:100798129 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0256 12 2273052 2275445 Gso11g0897 11 8047715 8050155 GST