Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0864 ATGTCGCGCCAGACGACGTCGTCTGCTTTCACTAAATCGAAGACCCTCGACAATAAATATATGCTGGGAGATGAGATTGGAAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCCATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATTATCATGCAAGAGATTGATTTGTTGAAGAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCTTCAAAGACAAAAAGTCACCTGCACATAGTTCTTGAGTATGTGGAGAATGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTGGCAGTATATATTGCCCAGGTGTTGGAAGGTTTGGTTTATCTACACGAACAGGGTGTTATCCATCGGGATATTAAGGGTGCAAACATATTGACAACTAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGCGTTGCTACAAAATTAACAGAGGCTGATGTTAACACTCATTCAGTTGTTGGAACACCTTACTGGATGGCCCCAGAGGTTATAGAAATGGCTGGGGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTACCTCCTTATTATGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAGCATCCGCCAATTCCAGATAGCCTTTCACCTGATATTACTGATTTTTTGCTTCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAAACTCTGTTGTCTCACCCCTGGATTCAAAACTGTAGACGTGTCCTGCAGTCTTCTCTTCGCCATAGTGGAACACTAAGAAATATTGAGGAAGATGATTCTGCAGATGCAGAAGTTTCTGGTGGCTATCATAAGAGTGCTTATGAAAACTCTTCTGTGGAGAAAGAGGACTCTGCAAAAGAGCATACAACTATGGCTGCTGATGGCAGCAAAGCTCATGAAGACAATGCTGCAGATTCTAATTTTTCCAATGAACAAACAGAGAAAGCAGATGATGCTCCATCGGATCAGGTTCTTACTTTAGCCATTCATGAGAAGTCATTTCTACAAGCTGGTTCTAGCAAACTCACTTCTAACAGAGAAGTGGTTAATTCCGAGTCTACTGGCAATCATGAAATTTCTAATGCTAAAGACCTTCATGAAGTTGTGATGAATGGAGAAGGTGGATCTCCACAATCAAGAGGAATGGCTAGCAAGGTTGGAGGGAAAGACAGTTCTGTAAACAATGGCAACAAATCATTTGCTTTTGGGCCAAGAGGTCAAGATAATGGTCCCCTTAAGGCAATGAAGATGCCAATCACTGTGGAAGGAAATGAGCTGAGTAGATTTAGTGACCCGCCAGGAGATGCCTACTTGGATGATTTATTTCATCCATTGGATAAACAACCTGGGGAGGTTGTAGCAGAGGCGTCCACTTCTACATCCACTTCACATATGACTAAAGGTAATGCATCTGCAATTGATGGTGTGAAAAATGACTTGGCTAAAGAGTTGAGAGCTACAATTGCTCGAAAGCAATGGGAGAAGGAAAGTGAAATTGGACAGGCAAACAATGGCGGGAATCTTTTGCACCGAGTGATGATAGGCGTTCTAAAAGATGATGTGATTGATATAGATGGTTTGCAGGTCTTCGACGAAAAACTTCCTGGAGAGAACCTTTTTCCTTTGCAGGCTGTTGAGTTCAGCAAACTAGTGGGTTCATTAAAACCAGAGGAATCAGAAGACATGATTGTTTCTGCATGTCAGAAACTTATTGGTATATTTCACCAACGTCCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGCTTACTTCCTCTGACAGATTTGCTAGAAGTTCCTAAAACACGTATCATATGTTCTGTGCTCCAGCTTATAAATCAAATAGTTAAGGACAACACTGATTTTCAAGAAAATGCATGTCTTGTTGGATTGATTCCTGCAGTCACAAGCTTTGCAGTACCTGATCGTCCTCGAGAGATTCGGATGGAAGCAGCTTATTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTGACATTACAAATGTTTATAGCTTGCCGCGGAATACCTGTTTTAGTGGGATTTCTTGAAGCTGATTATGCCAAGTACAGGGAGATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAGCAGTCAACGCCTAGAAATGATTTTTGCCGGATAGCTGCTAAGAATGGAATACTTCTCAGGCTTATAAATACTCTTTATAGCTTAAATGAGTCAACTCGATTAGCTTCTAGCTCTGCTGGGGGTGGATTTTCAGTTGACGGTTCAGCTCAACGCCCACGATCTGGTATCTTGGATCCCAATCATCCTTATATCAATCAGAATGAGACAATGCTATCTTCAGTAGATCAGCAAGATCCCCCTAAAGTGAGACGTGCAGTACCTGATCATCACTTAGAACCTTCATCATCCAATCCCCGAAGATCAGATGCTAACTACCCTGTGGATGTTGATAGACCCCAATCAAGCAATGCAACAGCTGATGAGAAGAGTTTGAACCAAGCATCCAGAGAATCTTCAGCAGGTGCATTGAAAGAGCGAGAGAATATGGATCGTTGGAAAACTGATCCTTCTCAGCCACGTATTTCTAATAACAGGACATCAACTGATAGGCCACCAAAATCTACAGAACCATCATCAAATGGGTTATCAGTAACAGGAACTATGCACCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGATAAAGAGCCCCCATCTGGACGCTTTTCTGGACAGCTTGAGTATATGCGTCAGTTTTCAGGATTAGAAAGACATGAAAGTGTACTCCCTTTGTTACATGCCACTGAAAAGAAAACAAATGGTGAACTAGACTTTTTAATGGCAGAATTTGCAGATGTTTCTCAACGTGGAAGGGAAAATGGAAATCTTGACTCTAGTGCTAGAGTTTCTCATAAAGTCACTCCCAAGAAATTAGGAACTTTGGGTTCCAGTGAAGGAGCTGCTTCCACATCTGGGATTGCATCACAGACAGCTTCAGGTGTACTCTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCGTCTGGACTACTTTCCCACATGGTTTCATCGCTGAATGCAGAAGTTGCCAGAGAGTATCTGGAGAAAGTGGCAGATCTTCTTCTTGAGTTTGCACAGGCAGACACCACAGTGAAATCTTATATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCTATTTTGTTGAAGATACTGAGGTGTATTAATCATCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCAATAAAATACTTGATACCAAATCTTGAACTGAAAGAAGGATCTCTTGTATCAGAGATACATCACGAGGTCTTGAACGCACTATTCAATTTATGCAAGATAAATAAGAGGAGACAAGAACAAGCAGCTGAAAATGGAATCATTCCCCATTTGATGCTATTCATCACATCAAATTCTCCCTTGAAACAGTATGCATTGCCTCTGCTATGTGACATGGCTCATGCATCTCGCAATTCAAGGGAGCAATTAAGGGCCCATGGCGGTTTGGATGTCTATTTGAACCTTCTTGAGGATGAGCTTTGGTCTGTGACAGCACTAGACTCTATTGCTGTTTGTTTAGCCCACGACAATGATAATAGGAAGGTTGAACAAGCACTGCTGAAAAAGGATGCAGTTCAGAAGCTTGTGAAGTTCTTCCAAGGCTGTCCAGAGCAGCATTTTGTACACATATTGGAGCCTTTCTTGAAAATCATCACAAAATCTGCAAGGATCAATACCACATTGGCTGTTAATGGATTAACACCGCTGCTCATTGCAAGGCTAGATCATCAGGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCCGTTTATGAGCATCACCCTCAGCCCAAGAAATTGATTGTGGAGAATGATCTACCTGAAAAACTTCAAAACTTGATAGGGGAACGGAGAGATGGACAAGTCTTGGTTAAACAGATGGCTACTTCATTACTTAAAGCACTACACATAAACACCGTTTTGTAA 4179 0.4159 MSRQTTSSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSSKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMAGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLLQCFKKDARQRPDAKTLLSHPWIQNCRRVLQSSLRHSGTLRNIEEDDSADAEVSGGYHKSAYENSSVEKEDSAKEHTTMAADGSKAHEDNAADSNFSNEQTEKADDAPSDQVLTLAIHEKSFLQAGSSKLTSNREVVNSESTGNHEISNAKDLHEVVMNGEGGSPQSRGMASKVGGKDSSVNNGNKSFAFGPRGQDNGPLKAMKMPITVEGNELSRFSDPPGDAYLDDLFHPLDKQPGEVVAEASTSTSTSHMTKGNASAIDGVKNDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLQVFDEKLPGENLFPLQAVEFSKLVGSLKPEESEDMIVSACQKLIGIFHQRPEQKIVFVTQHGLLPLTDLLEVPKTRIICSVLQLINQIVKDNTDFQENACLVGLIPAVTSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASSSAGGGFSVDGSAQRPRSGILDPNHPYINQNETMLSSVDQQDPPKVRRAVPDHHLEPSSSNPRRSDANYPVDVDRPQSSNATADEKSLNQASRESSAGALKERENMDRWKTDPSQPRISNNRTSTDRPPKSTEPSSNGLSVTGTMHQEQVRPLLSLLDKEPPSGRFSGQLEYMRQFSGLERHESVLPLLHATEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSHKVTPKKLGTLGSSEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNAEVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILRCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMLFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQGCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL* 1393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0864 1392 MobiDBLite consensus disorder prediction 379 397 - -
Gso11g0864 1392 PANTHER MAP KINASE KINASE KINASE 2 1351 - -
Gso11g0864 1392 Gene3D - 582 804 IPR011989 -
Gso11g0864 1392 MobiDBLite consensus disorder prediction 292 359 - -
Gso11g0864 1392 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0864 1392 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Gso11g0864 1392 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Gso11g0864 1392 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Gso11g0864 1392 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Gso11g0864 1392 SMART arm_5 1177 1216 IPR000225 GO:0005515
Gso11g0864 1392 SMART arm_5 616 656 IPR000225 GO:0005515
Gso11g0864 1392 SMART arm_5 1131 1175 IPR000225 GO:0005515
Gso11g0864 1392 SMART arm_5 1090 1130 IPR000225 GO:0005515
Gso11g0864 1392 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0864 1392 SUPERFAMILY ARM repeat 587 782 IPR016024 -
Gso11g0864 1392 MobiDBLite consensus disorder prediction 894 925 - -
Gso11g0864 1392 MobiDBLite consensus disorder prediction 843 878 - -
Gso11g0864 1392 MobiDBLite consensus disorder prediction 782 925 - -
Gso11g0864 1392 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Gso11g0864 1392 Gene3D - 1052 1200 IPR011989 -
Gso11g0864 1392 MobiDBLite consensus disorder prediction 379 451 - -
Gso11g0864 1392 Gene3D Transferase(Phosphotransferase) domain 1 17 307 - -
Gso11g0864 1392 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Gso11g0864 1392 MobiDBLite consensus disorder prediction 427 441 - -
Gso11g0864 1392 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1351 - -
Gso11g0864 1392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Gso11g0864 1392 CDD STKc_Cdc7_like 19 274 - -
Gso11g0864 1392 MobiDBLite consensus disorder prediction 827 842 - -
Gso11g0864 1392 SUPERFAMILY ARM repeat 1059 1385 IPR016024 -
Gso11g0864 1392 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0864 1392 MobiDBLite consensus disorder prediction 314 340 - -
Gso11g0864 1392 MobiDBLite consensus disorder prediction 806 822 - -
Gso11g0864 1392 MobiDBLite consensus disorder prediction 879 893 - -
Gso11g0864 1392 Gene3D - 1201 1387 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0864 Gso-Chr11 7727902 7746918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0864 1 1392 MAP Kinase Kinase Kinase AT3G13530 72.238 0.0 1984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Gso11g0864 Pkinase 5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0864 - - gmx:100813256 2719.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0235 12 2004215 2026727 Gso11g0864 11 7727902 7746918 GST