Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0832 ATGGATTCAGCTAATTCCCATGTTGTTGTTAAACAACTTCCGTGTTCTGTTCAGACCAGCAAACCAATCTGTTTGATGGGAAAGAACTCTTTAAAGCGAAAGTGTTTTGCTTCTATTGGGGCACATGAGATTTTCAGACCAGAGATGTGGAAAGCAGCACTAACAGAATTAACAGCCACTGCCTCTCTAATGTTCACCTTGACAACTTCCATCATTGCATGCTTGGACTCACATGAGATCGATCCTAAGCTTCTTGTTCCCTTTGCAGTCTTCACAATAGCCTTTTTGTTCCTAATTGTGACGGTTCCTCTCACGGGAGGCCACATGAGTCCTGTTTTCACATTCATTGCTGCTTTAAAGGGTGTTGTGACTCTCACCCGTGCCCTCATTTACGTGCTAGCACAATGCATTGGTTCAATAATTGGTTTCTTTATACTAAAATGTGTCATGGACCCAAAATTAGCTTACACATATTCCTTGGGAGGTTGTGCCATCAGTGGCCAAGGAGTGATCAATTCTTCTTCTGGTGGTATTAAGCCACTAGATGCTTTGTTAGTGGAATTCACTTGCACATTTGTGGTACTCTTTGTGGGGGTAACATTGGCATTTGATAAGAAAAGGTCAAGGGATTTGGGCTTGCCAATGGTGTGCTTGGTGGTGGCAGGAGCTATGGCATTGGCGGTATTTGTGTCCATAACTGTAACTGGGCGGGCCGGTTATGCGGGTGTGGGCTTGAACCCTGCAAGATGCTTAGGCCCAGCGTTGCTTCATGGAGGGTTACTCTGGGAAGGGCATTGGGTTTTCTGGCTTGGGCCCTTCTTGGCATGTGTAGTCTATTATGCTGTGTCTATTAACCTACCAAGGGAGGGTTTGGTTTGGGTGGATGGAGAATATGATGTGTTGAAATTGGCTCTCGGTTCTTGTGGGAATGTCCATAATACTTCCGTTTCAAAGGATCATCAACTAGAAGAACCAAGTGCAGGGTTCCAAGTCTAA 996 0.4498 MDSANSHVVVKQLPCSVQTSKPICLMGKNSLKRKCFASIGAHEIFRPEMWKAALTELTATASLMFTLTTSIIACLDSHEIDPKLLVPFAVFTIAFLFLIVTVPLTGGHMSPVFTFIAALKGVVTLTRALIYVLAQCIGSIIGFFILKCVMDPKLAYTYSLGGCAISGQGVINSSSGGIKPLDALLVEFTCTFVVLFVGVTLAFDKKRSRDLGLPMVCLVVAGAMALAVFVSITVTGRAGYAGVGLNPARCLGPALLHGGLLWEGHWVFWLGPFLACVVYYAVSINLPREGLVWVDGEYDVLKLALGSCGNVHNTSVSKDHQLEEPSAGFQV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0832 331 Pfam Major intrinsic protein 46 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g0832 331 PANTHER AQUAPORIN-LIKE 20 317 - -
Gso11g0832 331 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g0832 331 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g0832 331 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g0832 331 PRINTS Major intrinsic protein family signature 186 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g0832 331 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g0832 331 PRINTS Major intrinsic protein family signature 266 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g0832 331 Gene3D Glycerol uptake facilitator protein. 47 286 IPR023271 -
Gso11g0832 331 SUPERFAMILY Aquaporin-like 47 279 IPR023271 -
Gso11g0832 331 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 20 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0832 Gso-Chr11 7479913 7482398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0832 39 278 Major Intrinsic Protein MIP AT3G53420 28.968 6.59e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0832 K09866 - gmx:100804160 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0205 12 1737214 1738787 Gso11g0832 11 7479913 7482398 GST