Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0825 ATGGCTTGGAAGTGGCAAAAAGAGGTCACAAATTACCAAATGAGGAGAATCCTATGGCCAAAGACTCAAGAAAATAATGCAGCAAAAGCAGAGAAGGGTCACTTTGTTGTGTATAGCTCAGATAAGAGGCGCTTTGTGCTTCCTTTGCTGTATTTGAACAACAATATCTTCAGAGAGCTTTTCAAATTGGCAGAAGAAGAATTTGGTCTTTCTAGCAACGTGCCCCTAACGTTGCCTTGTGAAGCCACATTAATAGAGTACGTAATAACGTTTATCCAGAGAAACATAACTAAGGATCTGGAGGAAGCTGTGTTAATGTTCGTAGCTACTAGTCGATGCCAATCATATGTTGATCTTCATCGTGAACGAACCAATCAACATTTGCTTTACAGCTACTAA 399 0.3985 MAWKWQKEVTNYQMRRILWPKTQENNAAKAEKGHFVVYSSDKRRFVLPLLYLNNNIFRELFKLAEEEFGLSSNVPLTLPCEATLIEYVITFIQRNITKDLEEAVLMFVATSRCQSYVDLHRERTNQHLLYSY* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0825 132 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 132 IPR003676 GO:0009733
Gso11g0825 132 PANTHER AUXIN-RESPONSIVE PROTEIN FAMILY, PUTATIVE-RELATED 1 132 - -
Gso11g0825 132 Pfam Auxin responsive protein 13 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0825 Gso-Chr11 7421536 7421934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0825 32 100 Calmodulin-binding Proteins AT5G20810 40.000 1.26e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0825 - - gmx:100803097 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0199 12 1687560 1687958 Gso11g0825 11 7421536 7421934 GST