Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0824 ATGGCAAGAAAGTGGCAGAAAATGGCAGTGGGAAATCGCAAGAGAATTTCATACCCACCAAGGAACCATAATAATATTGTTCATATGCATTATTCATCCACAGCCAATAAGGGACACTTCGTTGTTTACAGCGTCGATCATAAGCGATTCGAGGTTCCCCTTAAGTACCTTAGCACGAACGTGTTCAGAGAGCTACTGAATTGGTCCGAAGAGGAGTTTGGGTTACCTTCCAATGGACCTATTACGCTGCCTTGTGATAGCGTGTTCTTGGACTACGTAATCTCGCTAATTCGAGAACGCGTTCCTGAAGAAGTGGAGAAAGCTTTGATCACTTCAATGGTTGCATGCCACCACGAGGCATCATCATCATCTTCGCGTGGTCTTAGGCAGAGCAACGAGCCAATGATTATCTATGGCTTTTGA 423 0.4492 MARKWQKMAVGNRKRISYPPRNHNNIVHMHYSSTANKGHFVVYSVDHKRFEVPLKYLSTNVFRELLNWSEEEFGLPSNGPITLPCDSVFLDYVISLIRERVPEEVEKALITSMVACHHEASSSSSRGLRQSNEPMIIYGF* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0824 140 Pfam Auxin responsive protein 3 97 IPR003676 GO:0009733
Gso11g0824 140 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 140 - -
Gso11g0824 140 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0824 Gso-Chr11 7418578 7419000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0824 1 97 Calmodulin-binding Proteins AT4G34750 30.303 1.05e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0824 - - gmx:100802572 267.7