Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0822 ATGATTAATATGGCAACCATGGAAGACATGAGCAACATGAGTGGTGAAATTACACTTCCAGGGTTCCGATTCCACCCAACTGAAGAAGAGCTTCTGGATTTCTATCTCAAAAACATGGTTGTTGGCAAGAAACTTCGTTACGATGTTATTGGTTTCCTCAACATCTATCAGCATGATCCATGGGATTTGCCTGGTTTGGCAAAGGTTGGGGAAAGAGAGTGGTACTTCTTCGTGCCAAGGGACAAAAAACATGGAAGCGGTGGAAGGCCAAACCGCACCACTGAAAAAGGGTTCTGGAAAGCCACCGGTTCAGACCGGAAAATAGTTACCTTATCTGATCCAAAGCGCATAATTGGGTTAAGGAAGACCCTGGTTTTCTATCAGGGAAGAGCTCCTAGGGGATGCAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACAATTGCAAACTACCCAAGGAAATCGTGTTATGCAAGATATATCGAAAGGCAACTTCGTTGAAAGTGCTGGAGCAAAGGGCAGCACTAGAGGAAGAGAGAGAGAAGAAGCAAATGGTTGATAATTCCCCTGCTTCTCCTCCTTCCTCCACGGACACCATGTCCTTTAGCAGCCCACAGGAAGAGCAAAACGTGCCCTTGCCCTTGTTGCAGCATGTTCTTAAGAAAGAGTCTGAAACAACTGAAGACATGGTAGTGTCAAAACAAGAAAAAACAACGAACCAATTGACCTTAAAAGACACCAAAAGCACTTGTGGCACATCACTTCAAATGCCCTTTGGGAAAGAGAAGCTGCCAGACCTTCAGCTTCCTATGCTCTCGGATTGGACCCAAGATACCTTTTGGGCTCAGTTGAATAGTCCTTGGCTCCAAAACTTTACTCCCACCAATATTCTAAACTTCTACTGA 909 0.4499 MINMATMEDMSNMSGEITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYQHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYQGRAPRGCKTDWVMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEQRAALEEEREKKQMVDNSPASPPSSTDTMSFSSPQEEQNVPLPLLQHVLKKESETTEDMVVSKQEKTTNQLTLKDTKSTCGTSLQMPFGKEKLPDLQLPMLSDWTQDTFWAQLNSPWLQNFTPTNILNFY* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0822 302 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 12 301 - -
Gso11g0822 302 MobiDBLite consensus disorder prediction 179 209 - -
Gso11g0822 302 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 301 - -
Gso11g0822 302 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Gso11g0822 302 SUPERFAMILY NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Gso11g0822 302 Gene3D NAC domain 27 168 IPR036093 GO:0003677|GO:0006355
Gso11g0822 302 MobiDBLite consensus disorder prediction 189 209 - -
Gso11g0822 302 ProSiteProfiles NAC domain profile. 18 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0822 Gso-Chr11 7398583 7400715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0822 13 302 NAC Transcription Factor Family AT2G17040 59.247 1.10e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso11g0822 NAM 7.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0822 - - gmx:100816770 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0197 12 1666342 1668672 Gso11g0822 11 7398583 7400715 GST