Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g0814 | ATGGAGTTCGTGGGAAAAACCGTTAGGAAAGAGGTGAAGGGGGTTGGGTTTATCACTGGAACAGTGAAATCCTACGACCCTTCCTCTGGTTTTTTCGAGATCGTTTACGATGATGGTGATTCTGAGGAATTGGAGTCTTCCCAGGTGGCTTCTCTACTTCAATTTCAACCGGGGAGTGTCAAGGCCAAGCCCCGGGTTGGTCGGAAACCTAAGAAGCGGCGCCGCCGCGTTGAGCAGAAGCCGGATGCTGAAGCCAGTTCAGGTAATGTTGGCGATAATTTGGTGGAGGAGGGTAGTGCTTTTAGGGGGGATTTGGATGGAAATGTTTCTTCTGCTAGTGGTGGGGATTTGGATTTAGGGTGTGAGGGGATTGATAGAACCATTGATGTTGATGTTGGGAATGGAGGGAATTCTATTGGCAATGTTAATGGGAGTGTGAAGGAAAACGGGGGTGGAGAGGAAATTGGTTTTGAGTATGGTTTGAACAAGAGTGTCTCTGCTAATGGTAGTTGTGTCAAGGATGGGCTTGATTTGAATGCTAGGCTTAATCTCAATGAGGATTTTAATCTGAATGATGCTTGTAGTTTACCTCTTGACACCGAGGATGGTTTGAATAGAAGAGATTGTATTGATTTGAATTTGGATGTGAGTAATGAAGATGATGTTGGCGTGAATTCGGGTTACCTGGGTCGTTTGGGTGGGGAGGCATTGCAGCGGGAATGTAATTTTGATTTGAATGTCGAGGTGTGTGAGGAAGGTAGGGAAACTCGGTGTGATGATGACGGAAATGGACATTCTGAGGTAGGTGATGCTTTGTTTAGTAGGATGGGGCAGCTCCAAAATGAAGAAGAGGTAAATGTTAATAATAGTTCTGTAGAAGATGACGGAGTTAATGGTAATTTGAATCATGTGTCTGATGCTGTCAAATTGGAGGGAGTTCACGTTTCTGCTGCCCATGCAGCTAAAGATGGTTCTCTGTGTTTGGTTGAGGAAAATGGAGCTGATGATGGCAAAGAGGATGAGGCAGCTATTGATTCTCATCAGATTTCAATTGCAATTTCTGTTAGGGATTCTGATTCTTTGGAGGCTCAGCGAGTTCATTGTCCTTCTGAAGGTGGTGTTGCCATAATTCATGAACACCAAGATGATCCAAGAAGTCCGTGCAAACAAGGAAATAGCCGAAGGAAAAGAAGAAAAGTATCAGATAATCCAGAAGTCACGCCAGAGACAGTTTTAAGGAGGAGTTCTCGTCGGGCATCAGCTAGAAAGCGGGTTTCAAGCACTGTACTAGTGGAGGTGACTGATGATCCTTTGTTGTCCTTGGAAACCAGTGCCTTAACAGAAGAAAAGCCTCTAATCCCTGGTTCTCAGAAATATGAGCAATGCAGTGATCCTCTTCCAAAGCTGCAATTGCCCCCGTCTTCTACAAATTTGAATTTAGATGGCGTTCCTGTTCTTGAACTTTTTTCTATTTATGCTTGTTTAAGATCATTCAGTACTTTATTATTTTTGAGTCCATTTGAGTTGGAGGATCTTGTAGCTGCCCTGAAGTCTGAAATCCCAAGTATATTATTTGACAGCATTCATGTTTCTATTTTGCAAACTCTGAGAAAGAATTTGGAATACCTTTCCAATGAGGGTTGCCAATCTGCATCCAATTGCCTTAGGAATCTTAACTGGGATTTTTTGGACCTGGTTACATGGCCTATTTTCATGGCTGAGTACTTTCTGATTCATGGCTCAGGATTTAAAACTGATTTTGATCTTAAACATCTAATGTTCAGAACTGATTACTACAAACAACCTGTAATTGTGAAAGTCGAGATTCTTCAGCATCTATGTAATGATATGATTGAATCAGAAGCCATAAGGTCAGAGCTTAACAGAAGATCTTTGGTAACTGAGTCTGATGTGGGTTTTGATCAGAATATGTATTTTGACACTGGCAAGAAAAGAAGAGCTGTAATGGATGTGTCTGGTGGCTCTTGCTTGACTGAGGAGAATGTGGATGACACAACTGACTGGAACAGTGATGAATGTTGCCTGTGCAAGATGGATGGTTGTTTAATATGCTGTGACGGTTGCCCTGCAGCATTCCACTCAAGATGTGTGGGAATTGCCAGTGGCCATCTCCCTGAAGGTGACTGGTATTGCCCCGAGTGTGGAATTGGCAAACACATAGCTTGGATGAAATCACGAAGGTCACTTCGAGGAGCAGACTTATTAGGGATGGATCTGGATGGCCGTCTCTATTTTAACAGCTGTGGTTACCTGTTAGTGTCAAACTCATCTGAAGCAGGGTCATTGTTCAATTACTACCACAGAAATGATCTACATGTAGTAATTGAAGCTCTAAAATCTATGGATCCTTTATATGAAGGCATACTAATGGCTATCTATAAGCATTGGGATATCAGTGCTAACTTGAGTGTGGGGGATAGTGTCTTTAGTCAAAGTTCCTGCAAGAACATGCAGATGAAGGGAGAATATTCTACTATGCATACATTTTTAGCACCTTTTACTTCAGAGACATGTTTGGACAAGAATCGGGCTAATGATCAAAGTAAGTTGGACGAAAATTCAACTATTGTTGGTTGTATGCATCTTGGCCAAGAGTATCCAAAAGCTGGGAACCGCCTAGACTCAACGACCACCATAGAAAGTCCTTGTGTTGCTTCTGATGGATCAGCTGATACCACACAGATTAGAACAGGTGTCGACAATGTTCAGATAAATGGGCTCAGTGATTCCCATAGATGTGATGAATCCTTGAATCAGCCAGGAATACCAGAAAGACACCATCCTGTTGGTGACTGTTCTAGGTTAGATGTGGGACGTAAAATAAACTTAAGATCTGTAGGTGCTAGTATTACCCCCTCCACGGACAATAAGGATACTTCAGAAGTACCTTCTGGAATTGACTACATAAACTATTACAGCTTTGCCCGAACAGCTTCATTTGTAGCACAGGAGTTGATGTGTAAATCACCTGAAAAGATGAATAAGATTTTTGCAATGTCTGAAGAAGAAATTATGTCAGACCAAGCAAAGGTCATTATGAAGAAATCTACTAACTTTTGTTGGCCAAGTATTCAGGACCTGAATGCAGCTGCCCACAAAGAAAAATGTGGGTGGTGCTTTACTTGCAAAGGTGAAAATGAAGACAGGGATTGCTTGTTTAATTCTGTGGTGAAGCCTATTTGGGAAGTGCCTAATAATACTTTAGTTGGGCTTCAACCCAGGAAGATCCAGAATGGACGTCTTAGAGATATCATATGTCTTATCTTCTCTCTTGAGGTTCGATTACGTGGGCTTTTGTTGGGTCCATGGTTGAATCTGCATCAAACTGATCTTTGGCATAAGGATCTTTTGAAGGCATCTGATTTTCTTCCTGTTAAACGATTATTGCTTCTTTTAGAATCCAATTTGCGGCTTCTTGCACTTTCAGCAGATTGGTTAAAGCATGTGGATTCTGTTGCTACAATGGGATCTGCTACTCATATTGTGGTCAGTTCATCACGCACATCTTCAAGGCATGGTATTGGAAGGAAAAGGGCCAGGAATACAGATATTGAAACAAGTTCATCTTCAAACACTGCTAGTGGTTTGGGGATGTACTGGTGGAGAGGTGGCAGACTCTCCCGAAAGTTGTTTAATTGTAAGGCTTTGCCTCACTCCCTGGTTACCAAGGCTGCTAGACAAGGTGGGTGTAGAAAGATACCAGGCATTTTATATCCTGAGAATTCAGATTTTGCACGTAGAAGCAGATTTGTTGCCTGGCGAGCTGCTGTTGAGATGTCAACAAGTGCCGAGCAGCTTGCTTTACAGGTTAGAGAGCTTTATTCAAACATAAGGTGGCATGATATTGAGAACAACCATTCCCTATATGTGTTGGACAAGGAATCTAGAAAATCAGTGAGGCTGTTCAAAAAATCAATCATACGCAGGAAGTGCACTGAAGGGCAATCTGTGAAATACCTTATTGATTTTGGGAAGAGAAGGGCTATTCCAGATGTTGTTATTAAACAGGGTTCTTTGTTGGAACAATCCTCTAGTGAGAGAAAAAAATATTGGCTGGAGGAGACTTATGTTCCATTGCATCTTCTAAAGAATTTTGAGGAAAAAAGAATTGTCCGCAAGTCCACGGATAAGAAACTTGGAAAAATTCTTGAGATTGGTAGAGTAAACAAGAAAATTCCTCAACAAAAGGGATTTTCATATTTGTTTACCAGATTGGAAAGATCTGATTGCCATCAATGTGGGCACTGCAACAAAGATGTTGCAATGAGGGATGCTGTGAGGTGCCTTCATTGCAAAGGATATTTCCACAAGAGGCATGTCAGGAAATCAAGTGGCACAAGAACCACTGGAAGCTCTTATTCATGTCACAGATGTCAAGATGGGTTGCAAGCAAAGACTAATACTAATAAAAGGAAAGTTGACTCAAAACTGCAGAAGATTCAAGCAAAGAAACGTAAAATTGTGCCTTCAGTTTGTAAATCATTGAACCTCAAGGGCAATAAAAAGGCATCGAGTAAGAATAAGATTCGACAGGTGAGATCTCGAAACAGTAAGAATATCCCATCAAGTATACCTCTTCGCCGTTCTACTAGGAAGGCCAAATCGTTGTATATGCATAGTCAATTGAATGGGGGACATAAAAAAGGAAAGTCAACTAAAAAGAATGTGGGGCGGAAAAAGGGAAAGCAAAGTCAAACCAAGAAGGTGACCCCTCAAAAGTCCAAGGAAACTACTGATCAATATAAGAAGTTGCCAGTTACTACTGCACATAAGAAGAGAACAAGAACCTGCAACAGTTATTGGCTTAATGGTCTTCAGTTGTCTAGAAAGTCAAATGATGAACGAGTAATGCTGTTTAAAGAGAAAAAGTGTGTTGTCTCATCTGAAGATTTCTCTGGCTCTGTTGATTATCCTAAATGCTGCCTTTGTTGTGGAAATGAATGCACCTTGAATTATATTGCGTGTGAAATCTGTGGAGATTGGTTTCATGGCGATGCTTTTGGGCTCAATGTGGAGAACACCAGACAACTTATTGGATTTAAGTGCCATGTTTGTCTTGATAGAACTGCTCCAATCTGTCCCCATTTGAAGATTAATGCATTGTCTCGCACTGAAAGCAATGCTGCAATTGAGTGTGCGGAGGAGTTATCTAATCCTGTTTCTCTACAACCTTTAAGTGAGGTTTGA | 5208 | 0.4144 | MEFVGKTVRKEVKGVGFITGTVKSYDPSSGFFEIVYDDGDSEELESSQVASLLQFQPGSVKAKPRVGRKPKKRRRRVEQKPDAEASSGNVGDNLVEEGSAFRGDLDGNVSSASGGDLDLGCEGIDRTIDVDVGNGGNSIGNVNGSVKENGGGEEIGFEYGLNKSVSANGSCVKDGLDLNARLNLNEDFNLNDACSLPLDTEDGLNRRDCIDLNLDVSNEDDVGVNSGYLGRLGGEALQRECNFDLNVEVCEEGRETRCDDDGNGHSEVGDALFSRMGQLQNEEEVNVNNSSVEDDGVNGNLNHVSDAVKLEGVHVSAAHAAKDGSLCLVEENGADDGKEDEAAIDSHQISIAISVRDSDSLEAQRVHCPSEGGVAIIHEHQDDPRSPCKQGNSRRKRRKVSDNPEVTPETVLRRSSRRASARKRVSSTVLVEVTDDPLLSLETSALTEEKPLIPGSQKYEQCSDPLPKLQLPPSSTNLNLDGVPVLELFSIYACLRSFSTLLFLSPFELEDLVAALKSEIPSILFDSIHVSILQTLRKNLEYLSNEGCQSASNCLRNLNWDFLDLVTWPIFMAEYFLIHGSGFKTDFDLKHLMFRTDYYKQPVIVKVEILQHLCNDMIESEAIRSELNRRSLVTESDVGFDQNMYFDTGKKRRAVMDVSGGSCLTEENVDDTTDWNSDECCLCKMDGCLICCDGCPAAFHSRCVGIASGHLPEGDWYCPECGIGKHIAWMKSRRSLRGADLLGMDLDGRLYFNSCGYLLVSNSSEAGSLFNYYHRNDLHVVIEALKSMDPLYEGILMAIYKHWDISANLSVGDSVFSQSSCKNMQMKGEYSTMHTFLAPFTSETCLDKNRANDQSKLDENSTIVGCMHLGQEYPKAGNRLDSTTTIESPCVASDGSADTTQIRTGVDNVQINGLSDSHRCDESLNQPGIPERHHPVGDCSRLDVGRKINLRSVGASITPSTDNKDTSEVPSGIDYINYYSFARTASFVAQELMCKSPEKMNKIFAMSEEEIMSDQAKVIMKKSTNFCWPSIQDLNAAAHKEKCGWCFTCKGENEDRDCLFNSVVKPIWEVPNNTLVGLQPRKIQNGRLRDIICLIFSLEVRLRGLLLGPWLNLHQTDLWHKDLLKASDFLPVKRLLLLLESNLRLLALSADWLKHVDSVATMGSATHIVVSSSRTSSRHGIGRKRARNTDIETSSSSNTASGLGMYWWRGGRLSRKLFNCKALPHSLVTKAARQGGCRKIPGILYPENSDFARRSRFVAWRAAVEMSTSAEQLALQVRELYSNIRWHDIENNHSLYVLDKESRKSVRLFKKSIIRRKCTEGQSVKYLIDFGKRRAIPDVVIKQGSLLEQSSSERKKYWLEETYVPLHLLKNFEEKRIVRKSTDKKLGKILEIGRVNKKIPQQKGFSYLFTRLERSDCHQCGHCNKDVAMRDAVRCLHCKGYFHKRHVRKSSGTRTTGSSYSCHRCQDGLQAKTNTNKRKVDSKLQKIQAKKRKIVPSVCKSLNLKGNKKASSKNKIRQVRSRNSKNIPSSIPLRRSTRKAKSLYMHSQLNGGHKKGKSTKKNVGRKKGKQSQTKKVTPQKSKETTDQYKKLPVTTAHKKRTRTCNSYWLNGLQLSRKSNDERVMLFKEKKCVVSSEDFSGSVDYPKCCLCCGNECTLNYIACEICGDWFHGDAFGLNVENTRQLIGFKCHVCLDRTAPICPHLKINALSRTESNAAIECAEELSNPVSLQPLSEV* | 1736 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g0814 | 1735 | SMART | PHD_3 | 1419 | 1466 | IPR001965 | - | |
Gso11g0814 | 1735 | SMART | PHD_3 | 1647 | 1693 | IPR001965 | - | |
Gso11g0814 | 1735 | SMART | PHD_3 | 679 | 722 | IPR001965 | - | |
Gso11g0814 | 1735 | MobiDBLite | consensus disorder prediction | 1179 | 1198 | - | - | |
Gso11g0814 | 1735 | SUPERFAMILY | FYVE/PHD zinc finger | 1643 | 1698 | IPR011011 | - | |
Gso11g0814 | 1735 | Pfam | DDT domain | 486 | 538 | IPR018501 | - | |
Gso11g0814 | 1735 | MobiDBLite | consensus disorder prediction | 1521 | 1536 | - | - | |
Gso11g0814 | 1735 | MobiDBLite | consensus disorder prediction | 1504 | 1592 | - | - | |
Gso11g0814 | 1735 | SUPERFAMILY | FYVE/PHD zinc finger | 664 | 721 | IPR011011 | - | |
Gso11g0814 | 1735 | PANTHER | PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN | 1 | 1710 | - | - | |
Gso11g0814 | 1735 | MobiDBLite | consensus disorder prediction | 375 | 419 | - | - | |
Gso11g0814 | 1735 | ProSiteProfiles | Zinc finger PHD-type profile. | 677 | 724 | IPR019787 | - | |
Gso11g0814 | 1735 | MobiDBLite | consensus disorder prediction | 59 | 93 | - | - | |
Gso11g0814 | 1735 | MobiDBLite | consensus disorder prediction | 1553 | 1573 | - | - | |
Gso11g0814 | 1735 | ProSiteProfiles | DDT domain profile. | 482 | 542 | IPR018501 | - | |
Gso11g0814 | 1735 | SMART | testlast3 | 482 | 542 | IPR018501 | - | |
Gso11g0814 | 1735 | ProSitePatterns | Zinc finger PHD-type signature. | 680 | 721 | IPR019786 | - | |
Gso11g0814 | 1735 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1640 | 1699 | IPR013083 | - | |
Gso11g0814 | 1735 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 665 | 737 | IPR013083 | - | |
Gso11g0814 | 1735 | MobiDBLite | consensus disorder prediction | 376 | 390 | - | - | |
Gso11g0814 | 1735 | PANTHER | PHD FINGER FAMILY PROTEIN | 1 | 1710 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g0814 | Gso-Chr11 | 7303240 | 7315272 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g0814 | 1 | 1704 | PHD Transcription Factor Family | AT5G12400 | 40.758 | 0.0 | 1106 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | DDT | Gso11g0814 | DDT | 6.1e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g0814 | - | - | gmx:100800973 | 3427.88 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso11g0814 | 11 | 7303240 | 7315272 | Gso11g0814 | 11 | 7303240 | 7315272 | ECH | |
Gso12g0190 | 12 | 1581760 | 1593890 | Gso11g0814 | 11 | 7303240 | 7315272 | GST |