Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0797 ATGGAGATAGAGCAAGCCACTACCAATGAAAAGGGTGTTACCGACTATGGTGATACTGTTTCAGAAAATAATAATAATACTAATAATAATAGGAGAGGGATGTATCTCGTGTGGGAAGATTTAACTGTTGTAGTTCCAAATTTTGGGAATGGACACACAAGAAGATTGCTTGATGGGTTGAGTGGATATGCTGAACCTAACAGAATCATGGCTATCATGGGTCCTTCTGGCTCTGGAAAATCTACTCTTCTTGATGCTTTAGCAGGTAGACTCTCTAGAAACGTTATCATGTCTGGAAATGTGCTTTTAAATGGAAAGAAGAGGAGATTAGACTATGGAGTTGTAGCTTATGTGACTCAAGAAGACATAATGTTGGGAACACTAACAGTGAGAGAGACAATATCTTACTCAGCTAATCTAAGGCTTCCATCAACCATGACCAAAGAAGAGGTTAATGATATCATAGAGGGAACAATTATGGAGATGGGTCTTCAAGACTGTGCTGATCGGCTAGTAGGGAATTGGCACTTGAGAGGCATAAGCGGTGGAGAAAAGAAAAGGCTAAGCATAGCACTTGAAATCCTCACAAGGCCAAGCCTCTTGTTCCTTGATGAACCCACCAGTGGTCTAGATAGTGCTTCAGCATATTTTGTTGCCCAAACTTTGAGAAATTTAGGTCATGATGGCAAGAGTACTGTTATCTCTTCTATACATCAACCAAGTAGTGAGGTTTTTGCACTCTTTGACGATCTCTTTCTTCTTTCTGGCGGTCAAACAATTTATTTTGGACCAGCCCAAAAGGCAGTTGAGTTCTTTGCCAAAGCAGGATTCCCTTGTCCAAGTAGAAGAAACCCTTCAGATCATTTCCTCCGTTGTATTAATTCAGACTTTGACGCTGTCACAACGACTATGATGGCCTGCCAAAGAGTACATGAAGAAATGTCAATAACGGGATCGCTATCAACTGCAGCAATCAAAGCAACACTCATAGAGAAATACCGATGGTCAGAGCACGCAACCACTGCAAGAGCAAGAATCAAAGAAATATCAACCACTGAAGGACATGGATTTGAAAGTAAAAGCAAATGCGAAGCAAAATGGTGGAAGCAACTATCAACGCTGACTCGTAGATCTGTCGTGAACATGTCTAGAGATGTGGGATACTACTGGATAAGGATAACTATCTATGTTGCCTTATCTCTCTCTGTTGGAACAATCTTTTATGGAGTTGGATCGAGTTATAGAGCCATTTTTGCAAGAGGAGCATGTGGCGCTTTTATATCTGGTTTCATGACATTCATGTCCATTGGGGGCTTCCCTTCTTTCATAGAAGAAATGAAGGTTTTCTACAAAGAAAGACTCAACGGGTATTATGGCGTTGGAGTCTACATTCTATCAAATTTTCTCTCTTCATTTCCCTTTGTGGCAGTGATGTCCATTGCTACGGGGACAATAACCTATTATATGGTTAAGTTTCGTACAGAATTTTCACATTATGTGTATATCTGTCTGGATCTTATTGGCTGTATTGCGGTTGTGGAGAGCTCCATGATGATTATAGCTTCACTGGTTCCCAACTTCCTCATGGGATTGATAATTGGAGCGGGATATATTGGTGTTATGATGATGACCGCAGGCTATTTCCGTCAGATCCCAGATCTTCCTAAGATCTTCTGGCGTTACCCAATATCATACATCAATTATGGCGCATGGGGATTGCAGGGAGCTTTCAAGAATGACATGATTGGAATGGAGTTTGATTCCTTAGAACCTGGGGGCCCAAAACTGAAAGGAGAAATCATCCTCAAAACCATGCTTGGCATTCGAGTTGATATTTCAAAATGGTGGGACTTAGTTGCAGTCATGATCATCCTCGTATTGCTTAGAGTTCTTTTCTTTTTCATTCTCAAATTCAAGGAAAGAGCTGCACCTTTTCTTTATAGTATCTACGCCAGGCAAACTCTGCAACGTATCAAGAAGCGACCTTCTTTCAGGAAAGGACCATCTTTCCCTTCCAAGCGTCACCAATCACTGCATCCCTTGTCTTCTCAAGAGGGTCTCAACTCCCCTATTCATTAG 2079 0.4127 MEIEQATTNEKGVTDYGDTVSENNNNTNNNRRGMYLVWEDLTVVVPNFGNGHTRRLLDGLSGYAEPNRIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGNVLLNGKKRRLDYGVVAYVTQEDIMLGTLTVRETISYSANLRLPSTMTKEEVNDIIEGTIMEMGLQDCADRLVGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAYFVAQTLRNLGHDGKSTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGPAQKAVEFFAKAGFPCPSRRNPSDHFLRCINSDFDAVTTTMMACQRVHEEMSITGSLSTAAIKATLIEKYRWSEHATTARARIKEISTTEGHGFESKSKCEAKWWKQLSTLTRRSVVNMSRDVGYYWIRITIYVALSLSVGTIFYGVGSSYRAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGVGVYILSNFLSSFPFVAVMSIATGTITYYMVKFRTEFSHYVYICLDLIGCIAVVESSMMIIASLVPNFLMGLIIGAGYIGVMMMTAGYFRQIPDLPKIFWRYPISYINYGAWGLQGAFKNDMIGMEFDSLEPGGPKLKGEIILKTMLGIRVDISKWWDLVAVMIILVLLRVLFFFILKFKERAAPFLYSIYARQTLQRIKKRPSFRKGPSFPSKRHQSLHPLSSQEGLNSPIH* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0797 692 Pfam ABC transporter 57 208 IPR003439 GO:0005524
Gso11g0797 692 SMART AAA_5 66 257 IPR003593 -
Gso11g0797 692 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 31 687 - -
Gso11g0797 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 274 IPR027417 -
Gso11g0797 692 Gene3D - 21 276 IPR027417 -
Gso11g0797 692 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524
Gso11g0797 692 CDD ABCG_EPDR 33 263 - -
Gso11g0797 692 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 31 687 - -
Gso11g0797 692 MobiDBLite consensus disorder prediction 675 692 - -
Gso11g0797 692 Pfam ABC-2 type transporter 238 312 IPR043926 GO:0140359
Gso11g0797 692 MobiDBLite consensus disorder prediction 661 692 - -
Gso11g0797 692 Pfam ABC-2 type transporter 370 578 IPR013525 GO:0016020|GO:0140359
Gso11g0797 692 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 281 IPR003439 GO:0005524
Gso11g0797 692 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0797 Gso-Chr11 7152105 7158941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0797 39 226 Acyl Lipid Metabolism Gene Families AT1G54350 32.000 1.38e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0797 K05681 - gmx:100806806 1352.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0797 11 7152105 7158941 Gso11g0797 11 7152105 7158941 ECH
Gso12g0175 12 1437956 1444945 Gso11g0797 11 7152105 7158941 GST