Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0779 ATGGCGGCTTACATGTGTGCAGACAGTGGCAACCTCATGGCGATTGCGCAGCAAGTCATTAAGCAGAAGCAGCAGCAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACACTTGCTACACCACCAACAGAACCCTCTCTCCCTTCACACTCCAATTCCATGGAACAACACTCCTCCTCTCGGCTACCCTCTACCTCCCACCACCGATTTCCCCCCCGACCCCTTCCAACCCGATCCCCCTTTCCACTTCCAACCCGACCCCCACTCCTTCCGCTTCTCCGACTTCGACTCCGACGACTGGATGGACTCCCTCATCGCCGCCGCCGACACCACTGATTTCCCCTTCCCCCCCTCCGATCTCAACCCGCTCCCTCTCCAACCCACTCCCCCTCCCCCTCCCCCTCCACCGCCCCAGTCCCCCGTGGACTCCGACTCCGACTCCTCCGTACATCCCCTCCTCAAAGCCCTGGCCGAGTGCGCCTCCCTGGCCGAAACGGAGCCGGATCAGGCCGCGGAATCCCTAAGCCGTTTGCGAAAATCCGTTTCCCAGCACGGAAACCCCACTCAGCGAGTGGGCTTTTACTTCTGGCAGGCCCTCTCCCGCAGAGAAGAAAAGGGCCATAATAGCACTTGGGATGAGGAGTTAACACTCTCTTACAAAGCCCTGAACGACGCCTGCCCTTACTCCAAGTTCGCTCACTTAACCGCCAACCAAGCCATCCTTGAAGCCACCCAAACCGCCTCCAACATCCACATCGTCGACTTCGGTATCGTCCAAGGGATTCAATGGGCCGCACTCTTGCAAGCTTTCGCCACTCGTCCTTCTGGAAAGCCCAATAAGATCAGAATCTCCGGCATCCCCGCCCTCTCCCTTGGTTCCTCTCCCGGCCCCTCTCTCTCCGCCACCGCCCACCGCCTCTCCGACTTCGCCAAGCTTCTCGACTTGAACTTCCACTTCACTCCTATTCTCACTCCCATTCACCAACTCGACCGCAACAGCTTCTGCATTGACGACACTAACGAAGCCTTGGCTGTTAACTTCATGCTCCAGTTGTATAACCTCCTCGACGAGCCTCCCACCGCTGTTGACACTGCGCTCAGGTTGGCCAAGTCTTTGAACCCCAAAATTGTCACCCTTGGCGAGTACGAAGCAAGCGTCACACGTTTCGGCTTTGTCAACCGCTTCAAGACTGCGTTTAAGTACTTCTCTGCTGTGTTTGAGTCTCTGGAGCCTAATTTGGCCGCGGACTCGCCGGAGAGGTTTCAGGTGGAGAGTCTTCTTCTCGGGCGGCGAATCGCGGCGGTCATTGGGGGGCCCGGGTCGGTGAGGAGGGAGAGTATGGAGGACAAAGAGCAGTGGAGGGTTCTGATGGAGCGTGCTGGTTTTGAATCAGTGAGTCTAAGCCATTATGCAATTAGTCAAGCTAAGATACTTCTCTGGAATTACAGTTACAGTTCTCTGTTTTCGCTGGTGGAATCTACACCACCGGGGTTTTTGTCTCTGGCTTGGAAGGATGTTCCTCTCTTGACCGTCTCCTCTTGGCGTTAG 1560 0.5679 MAAYMCADSGNLMAIAQQVIKQKQQQEQQQQQQQQQQQQQHLLHHQQNPLSLHTPIPWNNTPPLGYPLPPTTDFPPDPFQPDPPFHFQPDPHSFRFSDFDSDDWMDSLIAAADTTDFPFPPSDLNPLPLQPTPPPPPPPPPQSPVDSDSDSSVHPLLKALAECASLAETEPDQAAESLSRLRKSVSQHGNPTQRVGFYFWQALSRREEKGHNSTWDEELTLSYKALNDACPYSKFAHLTANQAILEATQTASNIHIVDFGIVQGIQWAALLQAFATRPSGKPNKIRISGIPALSLGSSPGPSLSATAHRLSDFAKLLDLNFHFTPILTPIHQLDRNSFCIDDTNEALAVNFMLQLYNLLDEPPTAVDTALRLAKSLNPKIVTLGEYEASVTRFGFVNRFKTAFKYFSAVFESLEPNLAADSPERFQVESLLLGRRIAAVIGGPGSVRRESMEDKEQWRVLMERAGFESVSLSHYAISQAKILLWNYSYSSLFSLVESTPPGFLSLAWKDVPLLTVSSWR* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0779 519 SUPERFAMILY Formin homology 2 domain (FH2 domain) 131 262 - -
Gso11g0779 519 Pfam GRAS domain family 157 519 IPR005202 -
Gso11g0779 519 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 157 518 IPR005202 -
Gso11g0779 519 MobiDBLite consensus disorder prediction 60 88 - -
Gso11g0779 519 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 157 518 - -
Gso11g0779 519 MobiDBLite consensus disorder prediction 121 145 - -
Gso11g0779 519 MobiDBLite consensus disorder prediction 21 94 - -
Gso11g0779 519 ProSiteProfiles GRAS family profile. 147 519 IPR005202 -
Gso11g0779 519 Coils Coil 13 41 - -
Gso11g0779 519 MobiDBLite consensus disorder prediction 21 58 - -
Gso11g0779 519 MobiDBLite consensus disorder prediction 114 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0779 Gso-Chr11 7008788 7011249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0779 3 519 GRAS Transcription Factor Family AT5G66770 54.698 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso11g0779 GRAS 5.4e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0779 - - gmx:100792494 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0154 12 1267466 1269533 Gso11g0779 11 7008788 7011249 GST