Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0774 ATGTCAGAAGCAGCAGCTACTTCTTTTGAAACTCAACACAGCTCTACAGAATCGTGTGTACCTAAAACAACAACTACTACTTCTTCTGATGTATCATCATCACCCCAAACTACCCACATTTTCAAATCTAAATTACCAGACATACCCCTCCCCAACAACCTCCCCCTCCACAAATACTGCTTCCTTAAACTCCCCGAAATCGCCGACCGGCCATGCCTCATCGCCGGCAGCAGAAAATACACCTACGGCGAAACTCACGTGACATCGCGAAGGGTGGCCGCCGGCATGTCGAAGCTGGGCATCCAGAAGGGAGACGTCATCATGATTCTCCTCCCGAACTCCCCGGAGTTCGTGTTCTTCTTCATGGCGTCCTCCATGCTCGGCGCCGTGGCCACCACCGCCAATCCCTTCTATACCGCCGCCGAAATCACGAAGCAACTCGCCGCCTCCAAGGCCAAGCTTGTAGTCACCCTCTCCGCCCACGTCCACAAGCTCGACCAACAACAGGGTTTGAAGGTGGTCACCGTGGACGAGCCGGCGGCGGATGAGAACTGCATGAGTTTCCGGGAAGGCGAGGAGAGCGAGGTGGCGGAGGTGGAGATATCGGCGGAGGACGCGGTGGCGCTGCCGTTCTCGTCGGGGACTACGGGGCTGGCGAAGGGGGTGGTTCTGACGCACAAGAGCCTGGTGACGGGCGTGGCGCAGAACATGGAGGGAGAGAACCCGAACGTGTACCTGAAGGAAGAGGACGTTGTGCTGTGCGTGCTTCCCTTGTTTCACATATTCTCCATGCACAGTGTCATGATGTGCGCGCTCAGAGCGGGGAGTGCCATTTTGTTGATCGAAAAGTTTGAGATAAGGGCGCTGCTGGAGGAGATTGAGAGGCACAGGGTCACCGTGGCGATGGTGGTGCCGCCTCTCGTGGTGGCGCTGGCGAAGAACCCCGCGGTGGAGGAGTATGATTTGAGCTCCATACGGTTGGTCATGTCCGGGGCTGCGCCGCTGGGGCACCAGTTGGAAGAGGTTCTACGGAATAGGTTGCCCAACGCAATTCTGGGACAGGGATACGGGATGACAGAGGCTGGACCGGTGTTGGCGATGTGTTTAGGGTTTGCAAAGTATCCATTCCCGACAAAGACAGGCTCTTGCGGAACAGTAGTCAGAAATGCTGAGTTGAAGGTCATTCACCCTCTTACTGCCCTTTCTCTTCCCCCTAACCACCCTGGCGAAATTTGCATCCGTGGCCAACAGATCATGAAAGGTTACCTGAATGACGAGAAGGCTACTGCAGCAACTATTGACGTAGATGGTTGGCTTCATACAGGCGATATTGGCTATGTCGATGATGATGATGAGATTTTCCTGATTGACAGGGCCAAGGAGCTCATCAAATTTAAAGGCTTCCAGGTGCCACCAGCAGAACTTGAAGACCTTCTTATGAGCCACCCTTCCATTGCAGATGCGGCCGTTGTCCCGCAAAACGACGATGCTGCAGGTGAAGTTCCAGTGGCTTTCGTGGTGGGCTTTGATCTTACAGAAGAGGCAGTCAAGGATTTTATAGCGAAACAGGTAGTGTTTTACAAAAGACTACACAAAGTGTATTTTGTTCCTGCAATTCCAAAGTCTCCAACCGGAAAGATATTAAGAAAAGAACTCAGAGCAAAGCTCGCGAGCATTATTATTCAGAGGACCTAG 1695 0.5339 MSEAAATSFETQHSSTESCVPKTTTTTSSDVSSSPQTTHIFKSKLPDIPLPNNLPLHKYCFLKLPEIADRPCLIAGSRKYTYGETHVTSRRVAAGMSKLGIQKGDVIMILLPNSPEFVFFFMASSMLGAVATTANPFYTAAEITKQLAASKAKLVVTLSAHVHKLDQQQGLKVVTVDEPAADENCMSFREGEESEVAEVEISAEDAVALPFSSGTTGLAKGVVLTHKSLVTGVAQNMEGENPNVYLKEEDVVLCVLPLFHIFSMHSVMMCALRAGSAILLIEKFEIRALLEEIERHRVTVAMVVPPLVVALAKNPAVEEYDLSSIRLVMSGAAPLGHQLEEVLRNRLPNAILGQGYGMTEAGPVLAMCLGFAKYPFPTKTGSCGTVVRNAELKVIHPLTALSLPPNHPGEICIRGQQIMKGYLNDEKATAATIDVDGWLHTGDIGYVDDDDEIFLIDRAKELIKFKGFQVPPAELEDLLMSHPSIADAAVVPQNDDAAGEVPVAFVVGFDLTEEAVKDFIAKQVVFYKRLHKVYFVPAIPKSPTGKILRKELRAKLASIIIQRT* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0774 564 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 39 555 - -
Gso11g0774 564 PANTHER 4-COUMARATE--COA LIGASE 3 39 555 - -
Gso11g0774 564 MobiDBLite consensus disorder prediction 1 36 - -
Gso11g0774 564 Pfam AMP-binding enzyme 69 465 IPR000873 -
Gso11g0774 564 CDD 4CL 50 552 - -
Gso11g0774 564 ProSitePatterns Putative AMP-binding domain signature. 209 220 IPR020845 -
Gso11g0774 564 Pfam AMP-binding enzyme C-terminal domain 474 546 IPR025110 -
Gso11g0774 564 Gene3D - 459 559 IPR045851 -
Gso11g0774 564 SUPERFAMILY Acetyl-CoA synthetase-like 40 559 - -
Gso11g0774 564 Gene3D - 32 458 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0774 Gso-Chr11 6965154 6968993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0774 21 472 Monolignol Biosynthesis Gene Families AT1G65060 65.727 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0774 K01904 - gmx:100790396 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1986 1 56385091 56389469 Gso11g0774 11 6965154 6968993 GST