Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0762 ATGCCCCAGAACTGCATAGCACCAAAACCAGAATACTGCAATAGTACTCATCACTCTGTGGAAGAACCACCAGAGATGACCGAGCCACATGACTCAACTGTTATTTCCTATCCCATGCAAACCAATGAACAACAACAACAACCGTTCCCAAAACTCATTATGTACCCCATAACTCTGAAGTTTGAAGAGTTGGTGTACAAAGTTAAACTAGAGCAGAAAGGAGGGTGCTGGGGAAGTACATGGACTTGCAAGGAGAAGACCATACTGAATGGAATCACTGGTGTGGTGTGTCCAGGAGAAATACTAGCCATGTTGGGGCCATCAGGCAGTGGCAAAACCACACTTCTTACAGCACTCGGAGGCCGGCTCAGTGGAAAACTATCCGGTAAGATCACGTACAACGGCCAGCCTTTCTCAGGTGCCATGAAGAGAAGAACAGGCTTTGTGGCTCAGGATGATGTACTATACCCTCACCTAACCGTCACCGAAACACTAGTGTTCACTGCACTCCTAAGGCTTCCAAACAGCTTGTGCCGAGACGAAAAGGTTCAGCATGTTGAGAGAGTGATCACTGAGCTAGGACTGACTCGTTGCAGGAGCAGCATGATAGGAGGACCACTTTTTAGAGGAATATCAGGTGGAGAGAAAAAGAGAGTGAGCATAGGCCAAGAAATGCTCATCAACCCAAGCCTCTTGCTGCTGGATGAGCCTACTTCTGGCTTGGATTCCACCACAGCACAAAGGATCCTCAACACGATCAAACACCTCGCCAGCGGTGGCAGAACTGTTGTCACAACCATTCACCAACCCTCTAGTAGGCTCTACTACATGTTTGATAAGGTGGTGTTGCTCTCTGAAGGCTGCCCCATCTATTATGGTCCTGCTTCAACTGCCTTGGACTACTTCTCATCAGTTGGATTTTCCACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCCCCGGACTCCAAGCATGCAACTGAACAAAGTGAGGGACTAGAACAGGAGAGAAAGCAGGTGAGAGAATCTCTCATCTCTGCTTATGAGAAGAATATAGCTACAAGGCTGAAATCTGAGGTTTGCAGTCTGGAAGCTAACAACTACAATATCACAAAAGATGCTTGTGCAAGAAATTCGATAAAGCCAGAACAATGGTGCACGAGCTGGTGGCATCAGTTCAAAGTACTATTGCAAAGGGGAGTGAGGGAGCGAAGGTATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTTGTAAGTGTTGCTTTTCTTGGTGGACTATTGTGGTGGCATACTCCAGAGTCACACATTGAAGATCGGGTTGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTCCCTCAAGAGAGGAGAATGCTGATCAAGGAACGGTCGTCTGGAATGTACCGCCTTTCTTCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCCCTGGAGCTTGCACTTCCAACTGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTGTGACTTTTATCCTTTCACTTCTTGTGGTGCTTTACAGTGTTGTTGTCTCTCAAAGCCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGGTTAAACAAGCAACTACTCTAGCTTCTGTGACAACCCTTGTGTTTCTCATTGCTGGAGGGTACTATATACAACAGATTCCTCCATTCATAGTGTGGCTCAAGTACTTGAGCTACAGCTACTACTGTTACAAGCTGCTTTTAGGTGTCCAGTACAATGAAAATGACTATTATCAATGCTCAACGGGGGAGCTGTGCAAAGTTGCAGACTTTCCTCCTATCAAATCAATGGGCTTGAATCATTTGTGGGTTGATGTGTGCATTATGGCCATGATGTTGGTGGGTTATCGACTAGTTGCTTATTTAGCACTGCATAGAGTTAGGTAG 1983 0.4579 MPQNCIAPKPEYCNSTHHSVEEPPEMTEPHDSTVISYPMQTNEQQQQPFPKLIMYPITLKFEELVYKVKLEQKGGCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNGQPFSGAMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLCRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKHLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDSKHATEQSEGLEQERKQVRESLISAYEKNIATRLKSEVCSLEANNYNITKDACARNSIKPEQWCTSWWHQFKVLLQRGVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYQCSTGELCKVADFPPIKSMGLNHLWVDVCIMAMMLVGYRLVAYLALHRVR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0762 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 303 IPR027417 -
Gso11g0762 660 CDD ABCG_EPDR 56 293 - -
Gso11g0762 660 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 46 658 - -
Gso11g0762 660 Pfam ABC-2 type transporter 268 363 IPR043926 GO:0140359
Gso11g0762 660 Pfam ABC transporter 90 239 IPR003439 GO:0005524
Gso11g0762 660 Gene3D - 78 305 IPR027417 -
Gso11g0762 660 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 311 IPR003439 GO:0005524
Gso11g0762 660 Pfam ABC-2 type transporter 399 604 IPR013525 GO:0016020|GO:0140359
Gso11g0762 660 Coils Coil 330 350 - -
Gso11g0762 660 SMART AAA_5 98 288 IPR003593 -
Gso11g0762 660 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524
Gso11g0762 660 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 46 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0762 Gso-Chr11 6877073 6880408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0762 88 287 Calmodulin-binding Proteins AT2G36910 29.858 9.33e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0762 K05681 - gmx:100794774 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1316 1 49685494 49688700 Gso11g0762 11 6877073 6880408 GST
Gso11g0762 11 6877073 6880408 Gso16g0619 16 7852335 7856164 PCT
Gso16g0619 16 7852335 7856164 Gso11g0762 11 6877073 6880408 PCT