Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0759 ATGGCAGAATCAATGGGGGGTGACACATGGAAGGCCCATGTGAGCATGGCATTGGCCCAGTTATTCTATGGTGGCTATACTGTAATCACTAAAGTGGCCCTTAATGTTGGGGTCAACCATCTAGTTTTCTGCTTCTACCGGAATTTCCTTGCCTTCTTTATTCTTGCTCCCCTCGCTTTTTTTATTGAAAGACGGACTAGACCACCCATTACCAAGAAGCTACTGATGTCATTCTTCTTTCTTGGATTGACAGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTGCACAGCCAGCTATTCCAGTCTTTACATTTCTGTTAACTGTGATGATGGGCATAGAAAGAGTGAACTTGCTCAGATATGAAGGTCTGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTCTGGTGCTATGTTGATGGTTTTGTATCGTGGTCCAGCTTTGATAGGAGATAAAGAAATGGATCATGTTCTACAAATTAAAAGAGGTGCCAGAGGTCAGCCAGAGCCCTCTGGATGGTTAATCAGTGGTTTACTGAATCTTGGATTTGACCATTTTCAGCTTGGGGTTATGTCCTTGATAGCAAACTGCTGCTGCATGACTGCTTTTCTAGCTATTCAGGCACCATTATTAAAAAAGTATCCTGCCAATCTATCTGTCACAGCGTATTCATTCTTCTTTGGAGTTGTACTGACGTTGATTGTATCATTGTTCATGGTTAATGAGTCAACTAACTGGATTTTGAAGCAATCAGAAATACTAGCCGTTGTATACGCTGGAAGTATTACATCTGCCCTAAACTATGGACTCCTTATATGGAGCAATAAGATCTTGGGGCCAACTTTGGTTGCCCTTTACTATCCACTTCAACCTGGGTTTTCTGTCATTCTGTCCCAAATTTTCCTTGGCACTCCAATTTACTTGGGAAGATAG 969 0.4159 MAESMGGDTWKAHVSMALAQLFYGGYTVITKVALNVGVNHLVFCFYRNFLAFFILAPLAFFIERRTRPPITKKLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAAQPAIPVFTFLLTVMMGIERVNLLRYEGLAKVGGTLICVSGAMLMVLYRGPALIGDKEMDHVLQIKRGARGQPEPSGWLISGLLNLGFDHFQLGVMSLIANCCCMTAFLAIQAPLLKKYPANLSVTAYSFFFGVVLTLIVSLFMVNESTNWILKQSEILAVVYAGSITSALNYGLLIWSNKILGPTLVALYYPLQPGFSVILSQIFLGTPIYLGR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0759 322 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 11 321 - -
Gso11g0759 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Gso11g0759 322 Pfam EamA-like transporter family 200 320 IPR000620 GO:0016020|GO:0016021
Gso11g0759 322 Pfam EamA-like transporter family 13 137 IPR000620 GO:0016020|GO:0016021
Gso11g0759 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 320 - -
Gso11g0759 322 PANTHER WAT1-RELATED PROTEIN 11 321 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0759 Gso-Chr11 6834906 6840918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0759 1 271 Nodulin-like Gene Family AT3G45870 62.362 1.77e-111 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0759 - - gmx:100793192 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0759 11 6834906 6840918 Gso16g0620 16 7876749 7887883 PCT
Gso16g0620 16 7876749 7887883 Gso11g0759 11 6834906 6840918 PCT