Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0758 ATGGCAGCAGTGACAGTGGCAGTGGGAGGAGACATATGGAAGGCCCATGTAGCCATGGCGTTTGTTCAGCTATTCAATGGAGGTTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGCATCAACCAGTTAGTTTTCTGTGTCTTCCGTGATCTCCTTGCCCTTTCCATCCTCGCACCCCTCGCTTATGTCCGTGAAAAACGGATTCGACCACCCACTACTAAGAACCTCCTGATTTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCGGCTGCCATACAGCCATCCATTCCAGTCTTTACCTTTCTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACTTACTCAGATATGATGGTCTGGCAAAAGTTGGAGGAACTATTATCTGTGTCTCTGGTGCCATATTTATGGTTTTGTATCGTGGTCCAGCTTTGATAGGATATGCCGAACTCGGTCATGTAACACAAAATGAAATAAGTGCCAGAGGTCAGCCAGAGCCATCTGGATGGTTAATTGGTGGCTTACAGAACCTTGGGTTTGACAATTTTCATCTTGGAGTTTTGTGCTTGATAGGGAACTGCATTTGCATGGCTGCATTTCTAGCCATTCAGGCATCGGTATTAAAAAAATATCCTGCAAACCTATCTGTCACAGCGTGTTCATACTTCTTTGGAGCTTTACTGATGGTGACAGTATCATTATTCATGACTACTGAGTCAACTGACTGGAGTTTGACGTCATCAGAAATACTTGCTGTTATTTATGCTGGAAGTATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATCATAGGGCCAGCCATGGTTGCCCTTTACAATCCGCTTCAACCTGCGTTTTCTGCCATCCTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGATCTTTTATCATTGCCGGTCTATATATGGTTACTTGGGCATCTTCTAGAGAAAGACAGGCAACTGTTGGAGTTACTCCTCATAGCTCTTGGGTCTCTGAACCACTTATTCATGAAAGAAGTGCACACCAGAGAGGTCTTGTTTTTTCGGTGTCCGCTAGCGTATCCCCAAAATCATCATCAGATTAA 1173 0.4348 MAAVTVAVGGDIWKAHVAMAFVQLFNGGYHVITKVALNVGINQLVFCVFRDLLALSILAPLAYVREKRIRPPTTKNLLISFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLRYDGLAKVGGTIICVSGAIFMVLYRGPALIGYAELGHVTQNEISARGQPEPSGWLIGGLQNLGFDNFHLGVLCLIGNCICMAAFLAIQASVLKKYPANLSVTACSYFFGALLMVTVSLFMTTESTDWSLTSSEILAVIYAGSIASALNYGLITWCNKIIGPAMVALYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIIAGLYMVTWASSRERQATVGVTPHSSWVSEPLIHERSAHQRGLVFSVSASVSPKSSSD* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0758 390 Pfam EamA-like transporter family 203 340 IPR000620 GO:0016020|GO:0016021
Gso11g0758 390 Pfam EamA-like transporter family 19 155 IPR000620 GO:0016020|GO:0016021
Gso11g0758 390 PANTHER WAT1-RELATED PROTEIN 13 382 IPR030184 GO:0016021|GO:0022857
Gso11g0758 390 PANTHER WAT1-RELATED PROTEIN 13 382 - -
Gso11g0758 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 346 - -
Gso11g0758 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0758 Gso-Chr11 6830109 6837278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0758 98 372 Nodulin-like Gene Family AT5G45370 63.799 4.06e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0758 - - gmx:100787738 733.021