Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0752 ATGTTTCCCCTTCAATGCAGCAACCACCCCATGTGCGCTTTCTCCGCCGTCACCGCCATCCTCCTCCTGTTCCCGGCGGCGACTTCCCAGGCCCAGATTCTCAAAAAGGAAACCTACTTTTTCGGTCCCTTCAACCAGTCCGACTTCACCACCTTGACGGTGCTGCCCAGCGCCGCCATCAACCTCGGCGCCCTCCAAGTAACTCCGGACAGCACCGGTAACGTCTCCCTCGCCAACCACTCCGGCAGAATCTTCTTCAACAACCCCTTCACCCTCTGGGATAACGACGACAACTTAAACGGAAAACTCGTTTCCTTCAACACCTCCTTTCTCATCAACGTTTTCCGTCCCCAAAACAACCCTCCCGGCGAAGGCATCACCTTCCTCATCACGGCTTCTACCACCGTCCCTAACAACAGCCACGGCCAGTTCCTCGGCCTCACCAACGCCGCCACCGACGGTAACGCCACAAACAAATTCGTCGCCGTCGAACTTGACACCGTGAAGCAGGACTTCGACCCCGACGACAACCACATCGGGTTAGACATTAACAGCGTCAGGTCCAACGTTAGTGTTTCTCTGACTCCCTTGGGGTTCGAGATCGCGCCTAACGTCACGCGCTTCCACGTGCTGTGGGTGGATTACGACGGTGACCGGAAGGAGATTGACGTGTACATCGCGGAGCAGCCTGATAAGGATGCTCCCATAGTTGCGAAACCGGCTAAGCCGGTTTTGAGTTCCCCTCTAGATCTTAAACAAGTTGTTAACAAGGTTTCTTATTTTGGGTTCTCTGCTTCCACCGGTGACAACGTTGAACTAAACTGCGTGCTGAGGTGGAACATTACCATTGAGGTTTTTCCTAAAAAGAATGGAATTGGAAAAGCGTTGAAGATTGGTTTAAGTGTAGGGTTGACTATGGTGGTTCTTATTGTGGCGGGTGTTGTTGGGTGGGTTTGTTGGTTGAAAAAGAAGAAAAGGGGAAATGAGTCTCAGATTTTGGGAACTCTCAAGAGTCTACCTGGAACTCCCAGAGAGTTTAGGTATCAGGAACTGAAGAAAGCGACTAATAAGTTCGATGAGAAGCATAAGCTTGGACAGGGTGGATACGGCGTCGTTTACAGAGGGACACTTCCCAAGGAGAATTTGGAAGTGGCGGTTAAGATGTTCTCCAGAGATAAGATGAAAAGCACTGATGATTTCTTGGCTGAACTCACCATTATCAATCGCCTCCGTCACAAAAACCTTGTTCGCTTACTGGGATGGTGTCACAGAAATGGGGTCCTGCTCTTAGTATACGATTACATGCCTAATGGTAGTTTGGACAACCACATTTTCTGTGAGGAAGGTAGCAGCACAACCCCACTAAGTTGGCCTCTAAGGTACAAGATCATAACAGGGGTGGCTTCTGCATTGAACTACCTACACAATGAGTATGATCAGAAAGTGGTCCACAGAGACCTCAAGGCCAGCAACATCATGCTGGATTCGGACTTCAATGCCCGGTTAGGCGACTTCGGCTTGGCGCGGGCATTGGAGAACGACAAAACATCCTATGCAGAGATGGAAGGAGTGCATGGCACAATGGGGTACATTGCGCCCGAGTGCTTTCACACGGGGAGGGCGACAAGGGAATCAGATGTTTATGGTTTTGGAGCAGTGCTTCTTGAGGTGGTGTGTGGTCAGAGACCATGGACAAAGAATGAGGGGTATGAGTGCTTGGTGGATTGGGTATGGCACCTGCATCGTGAGCAAAGGATACTGGATGCAGTGGATCCGAGACTTGGGAATGGTTGTGTGGTTGAAGAGGCAGAGAGGGTTCTGAAATTGGGACTGGCATGCTCTCACCCCATTGCAAGTGAGAGACCAAAGATGCAAACAATTGTTCAGATCATATCTGGTTCAGTGAATGTGCCTCATGTCCCACCTTTCAAGCCAGCTTTTGTGTGGCCAGCTATGGATCTTTCAAGCCCTGCAAGTGACCTCACAACACCAACTACAACAACTGAGTACACACCCATGAGCAGTGACACACATTCTATGCATGTTCAATTCTCTGATAGCAACTCTCTGATCTAA 2076 0.5014 MFPLQCSNHPMCAFSAVTAILLLFPAATSQAQILKKETYFFGPFNQSDFTTLTVLPSAAINLGALQVTPDSTGNVSLANHSGRIFFNNPFTLWDNDDNLNGKLVSFNTSFLINVFRPQNNPPGEGITFLITASTTVPNNSHGQFLGLTNAATDGNATNKFVAVELDTVKQDFDPDDNHIGLDINSVRSNVSVSLTPLGFEIAPNVTRFHVLWVDYDGDRKEIDVYIAEQPDKDAPIVAKPAKPVLSSPLDLKQVVNKVSYFGFSASTGDNVELNCVLRWNITIEVFPKKNGIGKALKIGLSVGLTMVVLIVAGVVGWVCWLKKKKRGNESQILGTLKSLPGTPREFRYQELKKATNKFDEKHKLGQGGYGVVYRGTLPKENLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKNLVRLLGWCHRNGVLLLVYDYMPNGSLDNHIFCEEGSSTTPLSWPLRYKIITGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARALENDKTSYAEMEGVHGTMGYIAPECFHTGRATRESDVYGFGAVLLEVVCGQRPWTKNEGYECLVDWVWHLHREQRILDAVDPRLGNGCVVEEAERVLKLGLACSHPIASERPKMQTIVQIISGSVNVPHVPPFKPAFVWPAMDLSSPASDLTTPTTTTEYTPMSSDTHSMHVQFSDSNSLI* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0752 691 SMART serkin_6 358 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0752 691 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 27 663 - -
Gso11g0752 691 ProSiteProfiles Protein kinase domain profile. 358 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0752 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Gso11g0752 691 Gene3D Phosphorylase Kinase; domain 1 343 434 - -
Gso11g0752 691 Gene3D - 36 294 - -
Gso11g0752 691 SUPERFAMILY Protein kinase-like (PK-like) 340 667 IPR011009 -
Gso11g0752 691 Pfam Legume lectin domain 41 284 IPR001220 GO:0030246
Gso11g0752 691 MobiDBLite consensus disorder prediction 659 691 - -
Gso11g0752 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 289 IPR013320 -
Gso11g0752 691 ProSitePatterns Legume lectins beta-chain signature. 161 167 IPR019825 -
Gso11g0752 691 CDD STKc_IRAK 364 631 - -
Gso11g0752 691 PANTHER - 27 663 - -
Gso11g0752 691 CDD lectin_legume_LecRK_Arcelin_ConA 44 280 IPR001220 GO:0030246
Gso11g0752 691 Pfam Protein kinase domain 359 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0752 691 Gene3D Transferase(Phosphotransferase) domain 1 435 637 - -
Gso11g0752 691 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0752 Gso-Chr11 6786461 6790025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0752 63 643 Receptor kinase-like Gene Family AT2G37710 38.399 2.15e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso11g0752 Pkinase 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0752 - - gmx:100784558 1395.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0752 11 6786461 6790025 Gso11g0752 11 6786461 6790025 ECH
Gso1g1326 1 49824108 49828564 Gso11g0752 11 6786461 6790025 GST