Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0749 ATGGAGTTTGAGCCTTTGAGTCTAAGCGACGAGGTTATTGAATTTGATATGATTGGTTTGGGGGATGATGCTGCCATTGACACGGAGCACCCTGTCGAGGATGATGAGGACCTTGTTAATATTGATAATAGTCCTGCTACTGCTTTTACTGTTCTAGCTGCTGGTTTGGGACCTCACATTGCTGGAGGGGACACTAATCTTGAACCTTGTCAAGGTATGGAATTTGAATCCGAAGAGGCTGCAAAGGCCTTTTATAACTCCTATGCTCGCCGTGTTGGCTTTAGTACGCGGGTGAGCATGTCACGACGCTCCAGGCGTGATGGTTCTATAATTCAGAGGTCTTTTGTGTGTGCCAAGGAAGGTTTTCGTGTGGAGAGGGAGAAGCATTTGGTTGATGGCAGAGTCAAGCGACCTCGTGCTGAAACCCGTGTTGGTTGCAAGGCCATGTTGGTTGTGAAAATCCAAGATTCTGGTAGATGGGTTGTTTCTTCTTTTCTCAAGGAACATAACCATGAATTGGTTCCGCCTGACAAGGTGCATTGCCTTCGTTCGCACCGCCATGTTTCAGGTCCAGCTAAGTCGTTGATTGATACTTTACAGGGTGCCGGAATAGGCCCTAGTGGAATAATGTCTGCACTAATAAAAGAATATGGAGCTATTAGCAATATCGGTTTCACTGAGCGTGACTGTAGGAATTATATGAGAAGCAGTAGGCAAAGGACCCTTGGAGGTGACACTCAAATCCTTTTGGATTACTTGAAGAGCAAACAAGCAGAGAATCCTTCATTTTTCTATGCTGTACAACTACAAGGTGATGAAGATCATTGCATGAGTAATATCTTCTGGGTTGATTCCAAGGCCAGGACTAACTACACTTACTTTGGTGACACTGTCACCTTTGACACAGCATATAGGTCAAACCGCTATAGATTGCCTTTCGCACCTTTCACTGGTGTAAATCATCATGGACAGCCTGTACTATTTGGTTGTGCTCTCCTGATAAATGAATCTGAGGCCTCTTTTGTTTGGTTGTTCAAAACCTGGCTTGAAGCAATGACAGGCCAACCTCCAGTTTCAATTACTACTGATCATGATAGGGTGATTCGTGCAGCCATCAACAATGTCTTTCCTGGTACCCGTCACCGATTTTGTAAGTGGCACGTTTTTAAAGAGTGCCAAGAGATGTTATCACATGTGCTTTCTGAACATCTTAATTTTGAAGCTGACCTCCACAAATGTGTTAATCTGACGGAGTCCATTGAGGAGTTTGAGTCTTGTTGGTCCTCCCTAATTGATAGGTATGATCTCAAAGAACACGAATGGCTAAAAGCAATTTATGGTGATAGGCGGCAGTGGGTACCAGTGTACTTGAGGGACACATTTTTTGCTGAAATGTCAATAACACAGCGAAGTGATAGCATAAACTCTTATTTCGATGGATATATCAATGCATCAACAACACTTCAGCTTTTTGTCAAGCAGTATGAGAAAGCTCTGGAGAGCCGTTATGAAAAAGAAGTCAAAGCTGATTATGACACAATTAACACTACTCCAGTTCTGAAGACTCCATCACCTCTAGAGAAACAGGCAGCTGAAGTTTACACAAGAAGATTGTTTATCAAATTTCAAGAAGAGTTGGTTGAGACATTAACATTCTTGGCAAACAAAGTAGATGAGAAAGAAATAATTACTGTGTATAGAGTAGCCAAATATGGGGAAATGCACAGGGCCTACTTTGTCAGATTTAACTCTTTTGAGATGAAAGCTACTTGTACCTGCCAGATGTTTGAGTTTTCTGGTCTAGTTTGTAGACATATATTGACTGTCTTTAGGGTTATAAATCTTCTTACTTTACCATCTCATTATATTTTAAAAAGATGGAGCAGGATAGCTAAAAGTGGGGCCATATTGGATGAACGTACTACTAATTTGTCAACTCGTGCCCAAGAATCCCTAACTATCCGATACAATAACCTTCGTCACAAGGCCCTTAAGTATGCTGATGAGGGAATAAACTCTCCAAAAGTTTATGATGTGGCATTGAGTGCACTTCTGGAAGCTGCGAGTAAAGTGGCACTTGCAACAAAAAATGGTGGAAGGCAGACTATTTTAAATGGAACATGTGAAGAAGACCTTCATCAGAGCAATGAAGTAACTACAAGTTGCAGCGATTCTCCTATTGGTTCACAACAATCTTCATACAAGGATGACCAAGATAGAACAATTGAGAAGTTGACACGGCAACTTGACCGAGCTCGAAGGAAGTGTGAAGTCTATAGGTCCAACTTGCTGTCGGTTTTAAAAGATATTGAAGAGCAGAAGCTACAATTATCAGTTAAAGTCCAAAATATTAAGTTAGAAATGAAAGATTGA 2373 0.4151 MEFEPLSLSDEVIEFDMIGLGDDAAIDTEHPVEDDEDLVNIDNSPATAFTVLAAGLGPHIAGGDTNLEPCQGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGSIIQRSFVCAKEGFRVEREKHLVDGRVKRPRAETRVGCKAMLVVKIQDSGRWVVSSFLKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGAISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLKSKQAENPSFFYAVQLQGDEDHCMSNIFWVDSKARTNYTYFGDTVTFDTAYRSNRYRLPFAPFTGVNHHGQPVLFGCALLINESEASFVWLFKTWLEAMTGQPPVSITTDHDRVIRAAINNVFPGTRHRFCKWHVFKECQEMLSHVLSEHLNFEADLHKCVNLTESIEEFESCWSSLIDRYDLKEHEWLKAIYGDRRQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLQLFVKQYEKALESRYEKEVKADYDTINTTPVLKTPSPLEKQAAEVYTRRLFIKFQEELVETLTFLANKVDEKEIITVYRVAKYGEMHRAYFVRFNSFEMKATCTCQMFEFSGLVCRHILTVFRVINLLTLPSHYILKRWSRIAKSGAILDERTTNLSTRAQESLTIRYNNLRHKALKYADEGINSPKVYDVALSALLEAASKVALATKNGGRQTILNGTCEEDLHQSNEVTTSCSDSPIGSQQSSYKDDQDRTIEKLTRQLDRARRKCEVYRSNLLSVLKDIEEQKLQLSVKVQNIKLEMKD* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0749 790 Coils Coil 767 787 - -
Gso11g0749 790 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 764 IPR031052 GO:0006355
Gso11g0749 790 Pfam FAR1 DNA-binding domain 84 175 IPR004330 -
Gso11g0749 790 ProSiteProfiles Zinc finger SWIM-type profile. 578 614 IPR007527 GO:0008270
Gso11g0749 790 Coils Coil 735 762 - -
Gso11g0749 790 MobiDBLite consensus disorder prediction 715 735 - -
Gso11g0749 790 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 42 764 - -
Gso11g0749 790 SMART 26again6 589 616 IPR006564 GO:0008270
Gso11g0749 790 Pfam SWIM zinc finger 586 613 IPR007527 GO:0008270
Gso11g0749 790 MobiDBLite consensus disorder prediction 715 739 - -
Gso11g0749 790 Pfam MULE transposase domain 298 390 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0749 Gso-Chr11 6741001 6745547 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso11g0749 MULE 1.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0749 - - gmx:100782414 1573.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0749 11 6741001 6745547 Gso11g0749 11 6741001 6745547 ECH