Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0737 ATGAAGTGTTGTCGTGTTTCAATCTTTCTCTTATCCCTAATTCGTCTCTTTTTTTTCGCCTCAGAATCCCAACAACTCTCTCTTCCCTCTCTACCCCCCTCCTCGGTTAAACCGGCCACGGCACTTGTTGCTGCCCTCGATGGCACTATGTATTTGGTGGACAGTGTTTCTGCGAGGGTCATTTGGTCTTTTTCAACTGGATCTCCAATCTACCACCACTCCTATCGTGTTTCCATCAATGATCCCAACGTTACCGGTCTCATTGAATGCGGAGATGACTGGGAATTAATCCTCCATGACGCTCACTTTGGTAAAACGAGACTCTCTGAATCAATTGCAAATTATGTTGCTTTAACCCCTACCGAAACAAAGGAGGGAGCATCCATATTTGGATCCAAAAAAAACACTATGTTTGAAGTGGATGCGAAAACTGGAGTGCTTGTTCGAACGCACTATGATCTTGATCATGCTTCTAATGTGGTGTTGAGTGATGATGATCGGCGGCAGCGTGCTACAGCTACAAAGAATAATGAGCTTGTTGATCCTGCACAGCTGGACCCACCTGAGTTCTTGCTCAAGATAACTAGGACCGATTATGTTTTGAAATCTCTTGGTAAAGCAGGAATAGTTTTGTGGACTATGAACGTGGCTGAATTTAAGGCTAGATTAATTTGCCAACATAATGAATATCCTTCTGGAAGGGATTCATTTTATCCAGAGGATGGGTATGTTGTAGACCGTGGCTTAGATTTTGCTATGCCGTATGCATGTTGGGACATGAAACTAAATGAAGTCTACCGCCAACGCAAGAATTTTCTGTTACATCCGGCTGCTGGTATTTATCAAGAGAATGGTATGCTCCCATTCCATACTTCAGAGCTGATGCTTCCATCACAACCTGAAATTGATGGATTTATCCTTGGCCAGGGTGGTAATATGATGCTGCCTTTGCCCGTATCAAATTCTTTGCCCTCTTTGCAACAAAAAATCGACTTCTATGAGAGCAATGATAATGTAGCTATGCTTCCTCGGCCTCTTATGGAGATTACTACACAAGAGGAAGTTGATCCAAAAAAGGTGATTGAATGGTCAACAACATTACCCCTTGTGTTATTTACCATCTTTCTTGGCTTTTTTATTTTCTACCACTATTTGGTGGTTACAAATAAAGACCAAAACAGGGAGTTAAATTCAAAAAGTTTTCCTCCTAAGAAGAAGAAAGCACGCAAGTCAGTAAAGAACAATATCACCGTTGACAACAGACAGGATAAACCTATGTCATCGGCTGAGGAGGATATACTAACACATATGGAGACAAACACTGATACATATACACAGATGCAAGTTGATGGACGCAGAATTGGTAAACTGTTTGTATCAAACAAAGAAATTGCTAAGGGAAGCAATGGTACCATTGTTTTTGAGGGGACATATGAAGGCCGAGTTGTTGCTGTCAAACGTCTTGTCCAAGCTCATCATGATGTAGCCCATAAAGAAATCCAAAATCTCATTGCATCTGACAGACATCCAAACATTGTTCGATGGTATGGGGTGGAATGTGATCATGATTTTGTTTATCTTGCTCTAGAACATTGTACATGCAACTTGGATGATTTGATTCATATGTACTCTGATACATCAGAGAACCCAACAATTAGCGAGGATCAATATTCTAATTTTTTAAAAAATGCTCGAATGGAGTTGAGGAATGATATGCAATATCTTTGGAAAGCAAATGGATTTCCATCATCTCTGTTACTGAAATTGATGAGGGATGTAGTTTCTGGACTTGTTCATTTGCATGAACTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTTTTGATAATAAAAGAAAAATCATTATGTGCAAAGCTTTCTGATATGGGAATTAGTAAACGCCTTCTTGAGGATATGTCTTCTTTGGGTCACACTGTTACTGGCTGTGGAAGTTCAGGGTGGCAAGCACCGGAACAACTTGTTCAAGGACGTCAAACACGAGCTGTGGATTTATTTAGTTTAGGTTGTGTTCTCTTTTTCTGCATGACTGCAGGAAGACATCCATTTGGAGAACGTCTTGAGCGTGATGTCAATATTGTGAAAAATCAAAAGGATCTTTTCTTAGTGGAGTTTATTCCTGAAGCTGATGATCTTATTTCTTGTTTGTTAAACCCTAACCCTGATCTCAGGCTAACGGCGATTGAAGTATTGCACCATCCTCTTTTTTGGAGCTCTGAGATGAGACTTTCATTTCTTCGTGATGTAAGTGACAGGGTGGAACTTGAAGATAGAGAAATTGATTCTGATCTTTTGAAGGCACTAGAAAGCATTGCTCCACTGGCTTTAGGTGCAAAATGGGATGAGAAGCTAGATCCTGATTTCATAACTAACATTGGTCGTTACCGAAGATATAAATATGACAGTGTTCGAGACTTGTTGAGGGTCATGAGAAATAAGCTAAATCATTACAGGGAATTGCCTCAAGAAATTCAGGAACTGATAGGACCTGTTCCGGAAGGATTCAATGACTACTTTGCAAGTCGATTTCCAAGACTCTTGATTGAAGTGTACAAAGTTATATACAAAAGTTGCAAGGACGATGAATGCTTTCAAAGATATTTTAGAAACATTAACTAG 2640 0.3989 MKCCRVSIFLLSLIRLFFFASESQQLSLPSLPPSSVKPATALVAALDGTMYLVDSVSARVIWSFSTGSPIYHHSYRVSINDPNVTGLIECGDDWELILHDAHFGKTRLSESIANYVALTPTETKEGASIFGSKKNTMFEVDAKTGVLVRTHYDLDHASNVVLSDDDRRQRATATKNNELVDPAQLDPPEFLLKITRTDYVLKSLGKAGIVLWTMNVAEFKARLICQHNEYPSGRDSFYPEDGYVVDRGLDFAMPYACWDMKLNEVYRQRKNFLLHPAAGIYQENGMLPFHTSELMLPSQPEIDGFILGQGGNMMLPLPVSNSLPSLQQKIDFYESNDNVAMLPRPLMEITTQEEVDPKKVIEWSTTLPLVLFTIFLGFFIFYHYLVVTNKDQNRELNSKSFPPKKKKARKSVKNNITVDNRQDKPMSSAEEDILTHMETNTDTYTQMQVDGRRIGKLFVSNKEIAKGSNGTIVFEGTYEGRVVAVKRLVQAHHDVAHKEIQNLIASDRHPNIVRWYGVECDHDFVYLALEHCTCNLDDLIHMYSDTSENPTISEDQYSNFLKNARMELRNDMQYLWKANGFPSSLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLIIKEKSLCAKLSDMGISKRLLEDMSSLGHTVTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNQKDLFLVEFIPEADDLISCLLNPNPDLRLTAIEVLHHPLFWSSEMRLSFLRDVSDRVELEDREIDSDLLKALESIAPLALGAKWDEKLDPDFITNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELIGPVPEGFNDYFASRFPRLLIEVYKVIYKSCKDDECFQRYFRNIN* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0737 879 CDD RNase_Ire1 747 875 - -
Gso11g0737 879 Pfam Ribonuclease 2-5A 749 875 IPR010513 GO:0004540|GO:0006397
Gso11g0737 879 ProSiteProfiles Protein kinase domain profile. 458 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0737 879 SUPERFAMILY Protein kinase-like (PK-like) 448 756 IPR011009 -
Gso11g0737 879 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 22 875 - -
Gso11g0737 879 MobiDBLite consensus disorder prediction 395 427 - -
Gso11g0737 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Gso11g0737 879 PANTHER IRE1-RELATED 22 875 IPR045133 GO:0004521|GO:0004674|GO:0030968
Gso11g0737 879 Gene3D - 20 188 IPR015943 GO:0005515
Gso11g0737 879 Pfam Protein kinase domain 460 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0737 879 SMART serkin_6 458 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0737 879 Gene3D Phosphorylase Kinase; domain 1 444 530 - -
Gso11g0737 879 ProSiteProfiles KEN domain profile. 746 877 IPR010513 GO:0004540|GO:0006397
Gso11g0737 879 SMART PGNneu 808 862 - -
Gso11g0737 879 Gene3D KEN domain 746 879 IPR038357 -
Gso11g0737 879 Gene3D Transferase(Phosphotransferase) domain 1 567 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0737 Gso-Chr11 6581206 6587462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0737 484 742 MAP Kinase Kinase Kinase AT3G06030 26.616 1.55e-20 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Gso11g0737 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0737 K08852 - gmx:102661527 1725.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1346 1 50108021 50115053 Gso11g0737 11 6581206 6587462 GST