Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0735 ATGAGTGGTGTTGGTGGTGGGTGCCCCTGCCCCAGGGGCAATAGTGAGTGTTCCATAGAGGATCTGAATGGCGATACAGTGGGGAATTTGAATCAGAATGCTGCCAAACCTCCAAGGGACCATTCGGTTATGCGCCATTGCATCAGCTCTTCTTGGTCTGCTGAAACGGAATCAAATATGAATATTGTTGGACTTAAATCAAGCACAGAAGAAAAATCGAACTTTTCACTTGTAATGCGATCTGGAAGCTGTTCTGATAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATATGTGCTGATATTCTTAGTGAATGTGTCGATCTAGGGGAAGACCTTCCTTCTCCTGCAGCATTTTATGGGGTATTTGATGGACATGGAGGTGTTGATGCAGCATCATTTGCCAGAAAGAACATTCTCAAGTTTATTGTTGAAGATGCTCACTTCCCATGTGGAATTAAGAAAGCAGTTAAGTGTGCATTTGTGAAGGCTGATCTTGCATTTAGAGATGCTAGTGCTCTTGATAGTTCATCAGGCACCACTGCTCTAATAGCCCTTATGTTGGGAAGTTCCATGCTTATTGCCAATGCAGGAGATTCTCGTGCTGTATTGGGCAAACGAGGCAGAGCCATTGAACTTTCCAAAGACCATAAACCAAATTGCACATCTGAAAGATTAAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGATACCTCTATGGCCAACTATCGGTGGCACGTGCTCTTGGAGATTGGCACATCAAAGGTTCTAAAGGTTCCAAGAGCCCCTTAAGTTCTGAACCTGAACTAGAGGAGATTGTGCTGACAGAAGAAGATGAGTTTTTGATAATGGGATGCGATGGATTATGGGATGTGATGAGTAGCCAGTGTGCTGTTACAATGGTGAGGAGGGAGCTCATGCAGCACAATGATCCCACCACATGTGCAAAAGTACTTGTTGCTGAAGCCCTCCAACGCAACACCTGCGACAATCTGACAGTTGTGGTGGTGTGTTTCTCCAAAGATCCACCTTCTAAAATTGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCTGAGGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATGA 1125 0.4436 MSGVGGGCPCPRGNSECSIEDLNGDTVGNLNQNAAKPPRDHSVMRHCISSSWSAETESNMNIVGLKSSTEEKSNFSLVMRSGSCSDKGPKQYMEDEFICADILSECVDLGEDLPSPAAFYGVFDGHGGVDAASFARKNILKFIVEDAHFPCGIKKAVKCAFVKADLAFRDASALDSSSGTTALIALMLGSSMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLYGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTTCAKVLVAEALQRNTCDNLTVVVVCFSKDPPSKIEIPRSYRRRSISAEGLDLLKGVLNGR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0735 374 Gene3D - 63 345 IPR036457 -
Gso11g0735 374 CDD PP2Cc 79 340 IPR001932 -
Gso11g0735 374 SUPERFAMILY PP2C-like 74 341 IPR036457 -
Gso11g0735 374 SMART PP2C_4 70 338 IPR001932 -
Gso11g0735 374 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 22 361 - -
Gso11g0735 374 PANTHER PROTEIN PHOSPHATASE 2C 22 361 IPR015655 GO:0004722|GO:0006470
Gso11g0735 374 Pfam Protein phosphatase 2C 81 332 IPR001932 -
Gso11g0735 374 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Gso11g0735 374 ProSiteProfiles PPM-type phosphatase domain profile. 80 340 IPR001932 -
Gso11g0735 374 SMART PP2C_SIG_2 108 340 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0735 Gso-Chr11 6566966 6570168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0735 64 372 PP2C-type Phosphatase Gene Family AT3G51470 77.023 5.97e-172 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0735 K14803 - gmx:100781874 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1348 1 50136988 50139883 Gso11g0735 11 6566966 6570168 GST