Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0729 ATGGGAGGCTTATTACACTTTTTTGAATTCAATCAAGGGAGGATGGCCAAGAAAGTCCTTGCTCGTAAGAGACATCATGGTGGCCTGGAAGCTCCTCGTAATAGTCTAGATCTGCAAGTACAAACACCTCAGAACTACTGTCCAGAAGGAGAATTACCATACAATTATCAAGTAAAAGAAGAGGGAAGGTCTGAGAAAAACCGCTATTCAAATGTGGGTTCAATGAAAAAACTGATCAATGAGGAACTATCCAAACAATCAAGCACCAGACAAAATGCGCCAAGCCTTGTAGCAAGGTTGATGGGGATAGATACGATGCCATTAGACACTAAATATGTTGTTCCATCAGACAGAAAAATAAGTGAAAACATGGGGAAGAGGTCTTCAGTCAAAGGAGTGAATCGAAGGGGTTCAGTTAGTTGGGGTTCTTCCAACTTTAATTCTTCTAGTCAGATGGATTTTGATTCATTATATAAAGACATAGGTGATGATGATGATGGATGGAACCAGAGTTTTGGAGAACTAAGGCCACGGGAACATCCTCAGGAAGAGGAACTCCAAAAATTCAAGAAAGAGTTTGAAGCATACCAAGCAGCAAGGTTTCTGGAGTGTTCAAAGGTTGCTGAAATTGGCAGTGCTCCTAGACAATTGCTTGCTCAAGAAAACCTGAACAAGGAAAAGATGATGCATAACGATTCAGTTTTACACAGAGCGGCAGCAGGGAAGCTTGCAGATCTTGACAGGCATGCATTCAAAACGCCACCTGAAAGTTATGGTTCAGAATATCATGGTAAAGTGATGGAGTTAATCCCAGCTATGCAAAGGAAAACCATTCCTCCAAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGTCCTTAATGATGAAATCTTGCAACAAATTAGACACGTCTTCTTCTCCCACTAGGATAGTTATCTTGAAGCCTGGTCCTGATAGCATTTGCAACCATGAAGAAAATTTGACCATATCATCAGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAAGGTTCTGTGGTTCGAGGGAATGGAATTGAGACACCTTACAATGAAAAGCCATCTGATCCTAAACTAATAGCCCGTCACATAGTAAAGCAAGTCAGAGAAAGTGTGAGTAGAGATACTGGCACAAATTTACTCCACTCAGAATCAATAGGATCATACAAAAGTGAAATGGAGTTCAATGGACCAAGCTCCCCAGAATTTATCAGCAGAGATACCAGGAGGTTCTTGTCAGAGAGGCTAAGAAATGTTGGGAGAAGTGAAGCACATGCTGACATTCCTGAGGGAAAATCAAGTTCACTTTCACTAGACAACCATAAAGCTAGACTAAAGCAAGTGGGGGATGCAAATAACTGGGAAATTTCCAAAGAGGACACAGCAATACAAACAGGATCTTTCAGGCATGAACTCGATGAGAATATATTTCTCCACAAGGAGTTATCACCAAGAAACCTTGTAAGATCCTTGTCTGCTCCTGTATCACGTTCAGGAACATCATTTGGTAAGCTTCTTCTAGAGGACCGCCACATTTTAACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCTGTTGATGTCAAGAAACGGAAAAAGGATAGATTTAATATTAAAGAAAGAGTCTCCAATTTTAGATATAACCTTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAATGGTAGAATCACATGGCAATGAATTTGGTCCCTTTGTGAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTGTGGTGTGAGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCTTCTGTGTGCAGCAGTGTTCACGAAGACTTTTGGAGGCAAACTGAATATTTAAGTCCAATATCAACTCCTGATGTGTCTTCAAGAGACGATAATGTTGTGCCCCAGGTTTTCAGGGATATCAGCTCTGGTTTGAGTGAGCTAAGGAGACAACTCAATCAACTTGAATCTGATGGTCCTGAGGATTTGACTATGAAACAGGAGCCTGCTGAGTCTGAATTAGACCAATTAGAGGATCCAGCAGAATCTTACGTAAGAGATCTACTTGTTTCTTCTGGTCTGTACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAACCTATTGGCAACTCTGTTTATGAAGAAGTGGAAGAATCTCACAAGAAATTGGTCAAGGAAAATGATGAAATCTGTATCAAGGATCAGAATGAGAGTAAGCTAGACCACAAAGTTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGACCTCCTTTGACATTGTCTAGGTTCAGGAGGAAATTACGCAACTCTTCCATTTTGCCACCTTCTGGAAAGGAACTGTTGAGCTTAGTGTGGGACGTTATCCGTGTTTCTTTATATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGGATTAATAAATGATGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATGTTCTAA 2664 0.4054 MGGLLHFFEFNQGRMAKKVLARKRHHGGLEAPRNSLDLQVQTPQNYCPEGELPYNYQVKEEGRSEKNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDRKISENMGKRSSVKGVNRRGSVSWGSSNFNSSSQMDFDSLYKDIGDDDDGWNQSFGELRPREHPQEEELQKFKKEFEAYQAARFLECSKVAEIGSAPRQLLAQENLNKEKMMHNDSVLHRAAAGKLADLDRHAFKTPPESYGSEYHGKVMELIPAMQRKTIPPRSRTLSRDFEESLMMKSCNKLDTSSSPTRIVILKPGPDSICNHEENLTISSGTIQGRNSIEDFLEEVKERLKCELQGKIVKKGSVVRGNGIETPYNEKPSDPKLIARHIVKQVRESVSRDTGTNLLHSESIGSYKSEMEFNGPSSPEFISRDTRRFLSERLRNVGRSEAHADIPEGKSSSLSLDNHKARLKQVGDANNWEISKEDTAIQTGSFRHELDENIFLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSVDVKKRKKDRFNIKERVSNFRYNLALRGRLFGRRVQSMVESHGNEFGPFVRDVTSGPTVLMNCGVRHENSTEVPPSPASVCSSVHEDFWRQTEYLSPISTPDVSSRDDNVVPQVFRDISSGLSELRRQLNQLESDGPEDLTMKQEPAESELDQLEDPAESYVRDLLVSSGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESHKKLVKENDEICIKDQNESKLDHKVLLDLLNEALSVVLGPPLTLSRFRRKLRNSSILPPSGKELLSLVWDVIRVSLYPPSDISTYSLDTLVAQHLGSIPWSGLINDEINILERDIECLITDDLVEELTKDMF* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0729 887 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 886 - -
Gso11g0729 887 Pfam DUF761-associated sequence motif 89 107 IPR032795 -
Gso11g0729 887 MobiDBLite consensus disorder prediction 687 708 - -
Gso11g0729 887 Coils Coil 669 689 - -
Gso11g0729 887 Pfam Domain of unknown function (DUF4378) 714 881 IPR025486 -
Gso11g0729 887 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0729 Gso-Chr11 6513841 6520013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0729 75 886 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.824 9.25e-159 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0729 - - gmx:100779720 1733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0729 11 6513841 6520013 Gso11g0729 11 6513841 6520013 ECH
Gso1g1354 1 50190065 50196258 Gso11g0729 11 6513841 6520013 GST
Gso11g0729 11 6513841 6520013 Gso16g0941 16 25891021 25896536 PCT
Gso16g0941 16 25891021 25896536 Gso11g0729 11 6513841 6520013 PCT