Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0723 ATGGGTCTTTGCTTTGCTTCCCTCGCTACCCACCAAACACCCTCCAATAATTCCCCTCACTATTCAGGTTCAGCGCGTGAGATGGGAATTACTGAAAGCACTAGTGTTAATGGAGGAAGCAGTAGCATTAATAGCAATAACATGGTGTTTCCGAGTGTGGAAACGCGGAACTTGAAGCAGTTCAATTTCGCGGATCTGAAAGCAGCAACCAAGAGTTTCAAGTCGGATGCATTGCTTGGTGAAGGAGGTTTTGGCAAAGTTTACAAAGGATGGTTGCATGAGAAGACACTGACACCCACCAAAGCTGGATCTGGAATGGTGGTTGCTGTTAAGAAGTTGAACTCAGAAAGTTTGCAGGGCTTTCGTGAGTGGCAGTCAGAAATCAATTTCTTAGGAAGGATTTCTCACCCAAACCTGGTCAAGCTATTGGGTTACTGTTGTGACGATATCGAATTTCTCCTTGTGTACGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTCTTTAGAAGAAATACTAACAGTGAACCACTCTCTTGGGACACCCGAATCAAAATAGCTATTGGTGCTGCACGGGGCTTGGCTTTCTTACACACCTCAGAAAAGCAAATCATATACAGAGATTTCAAAGCCTCCAATATACTACTTGATGAGGATTATAATGCAAAAATTTCAGATTTTGGCTTGGCAAAATTAGGCCCTTCTGGGGAAGATTCACACGTGAGTACCAGGATCATGGGAACATATGGCTATGCTGCTCCAGAATACATTGCAACAGGTCACCTTTATGTAAAGAGTGATGTTTATGGTTTTGGTGTAGTGCTGCTTGAAATGCTGACAGGGTTAAGGGCACTTGACAAAAACCGCCCCATAGAGCAGCAGAATCTGATTGAATGGGCTAAGCCTTCTCTCTCTGATAAAAGAAAGTTGAAAAGCATCATGGATGAGAGGATAGAGGGTCAGTATTCAACCAAGGCAGCATTAAAATCAGCACATCTTATTCTAAAATGCCTTCAATGTGACCGTAAGAAACGTCCTCACATGAAAGATGTTCTTGACACATTGGAACACATCGAAGCTATCAAGGACAGAACGAAGTAA 1101 0.4305 MGLCFASLATHQTPSNNSPHYSGSAREMGITESTSVNGGSSSINSNNMVFPSVETRNLKQFNFADLKAATKSFKSDALLGEGGFGKVYKGWLHEKTLTPTKAGSGMVVAVKKLNSESLQGFREWQSEINFLGRISHPNLVKLLGYCCDDIEFLLVYEFMPKGSLENHLFRRNTNSEPLSWDTRIKIAIGAARGLAFLHTSEKQIIYRDFKASNILLDEDYNAKISDFGLAKLGPSGEDSHVSTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLRALDKNRPIEQQNLIEWAKPSLSDKRKLKSIMDERIEGQYSTKAALKSAHLILKCLQCDRKKRPHMKDVLDTLEHIEAIKDRTK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0723 366 ProSitePatterns Protein kinases ATP-binding region signature. 79 112 IPR017441 GO:0005524
Gso11g0723 366 SUPERFAMILY Protein kinase-like (PK-like) 47 357 IPR011009 -
Gso11g0723 366 ProSiteProfiles Protein kinase domain profile. 73 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0723 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Gso11g0723 366 PANTHER OS01G0588500 PROTEIN-RELATED 17 364 - -
Gso11g0723 366 Pfam Protein tyrosine and serine/threonine kinase 76 355 IPR001245 GO:0004672|GO:0006468
Gso11g0723 366 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 17 364 - -
Gso11g0723 366 Gene3D Phosphorylase Kinase; domain 1 35 158 - -
Gso11g0723 366 Gene3D Transferase(Phosphotransferase) domain 1 159 366 - -
Gso11g0723 366 CDD STKc_IRAK 79 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0723 Gso-Chr11 6456470 6460354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0723 59 355 Glycoside Hydrolase AT3G07070 50.671 1.89e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso11g0723 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0723 - - gmx:100777578 719.539