LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso11g0720	ATGAACCATCATAAATACTCTTCTCATCGTCACAATCTCTTCAATTCCTTTCTCACACTTGCCATTTTCATCATTCTTGGGTTTTCATTTTCAGCCACAGGCATGCAGAACCAGAACCCTTCTGAGGATGATTCCACCAATAAGGCTCCCTCTGATGACACACCCCATCCAACCAACAATGACAATAACAATCCGCCGGGTGAAAGCCTTATCATGAAAACCGTTAGGCAAGTGTTGGAGGAACTTGGTGGCAGTCGTGATGACAGTGATGGTGGTGTTGGTGATGGGACCCCTGTGGCTGTGGCTCTGGAAGTAGGTGGTGGGGGTGATGGAAGTGGCGGTGACGGTGGCGGTGTTGGTGGTGGACCTCCCGTGGCTATGGAAGCGAGTGATGGTGGTGATGAGGACAATGATAATGAGCATAGTGATAGTATTGGTGATAGTGTCCCTGTGGCTGTGGCTGTTAAGGTGGGTGGCCGTGGGGGTGACAATAGTGGTGGTGGGGCCACTGTGACTGTGTCAGTGGCATTGAGTGATGGTGATTATGGTGGCAGTAACGGTAGCGGTGGTAGCCCTGTGGCTGTTGCTGTGGCTGTGGGTGGTGGTTCAACGGTGATGGAGAGTGTGGTTGTGGGTACTGAGGGAGTGCAGGGGAGAAAGAGAAAAACTCCTCTAGTGAGAGACCCTCCCACTGGGAGACCTACTTGTCCTCTTTGCCAAAAAGAGTTTCAAACCTGGAAGGGCGCGTTTGGCCACATGCGTGCACACCCTGACCGTGATTATCGCGGTTTCTTCAAGCCTCCTGTGTTTGGATCCCCATCCTCAACCCAAGATCAACCACCTAGTGATGGCAAGGTGGCAGGTGATGATAGTGCAAAGAAGAGTACTGGTGAGGATAACACTGCAGAGAAAGGTTCAGCATCATTGCCTGTTCGAGTGCCGATGTTTGATCTGAATGAACTAATAGAGGAAGATGGATCCTCTCATGCTGCTGAGCCTGCTGAAGACATGAGTACCGGGGAGGGAAAGGGTTCGGGATTTGACTTGAATGAGATGCCCTCAGCTGAAGATTAA	1074	0.5102	MNHHKYSSHRHNLFNSFLTLAIFIILGFSFSATGMQNQNPSEDDSTNKAPSDDTPHPTNNDNNNPPGESLIMKTVRQVLEELGGSRDDSDGGVGDGTPVAVALEVGGGGDGSGGDGGGVGGGPPVAMEASDGGDEDNDNEHSDSIGDSVPVAVAVKVGGRGGDNSGGGATVTVSVALSDGDYGGSNGSGGSPVAVAVAVGGGSTVMESVVVGTEGVQGRKRKTPLVRDPPTGRPTCPLCQKEFQTWKGAFGHMRAHPDRDYRGFFKPPVFGSPSSTQDQPPSDGKVAGDDSAKKSTGEDNTAEKGSASLPVRVPMFDLNELIEEDGSSHAAEPAEDMSTGEGKGSGFDLNEMPSAED*	358

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso11g0720	357	MobiDBLite	consensus disorder prediction	83	147	-	-
	Gso11g0720	357	ProSitePatterns	Zinc finger C2H2 type domain signature.	236	256	IPR013087	-
	Gso11g0720	357	PANTHER	C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY	109	309	-	-
	Gso11g0720	357	MobiDBLite	consensus disorder prediction	263	357	-	-
	Gso11g0720	357	PANTHER	C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED	109	309	IPR044653	GO:0003700
	Gso11g0720	357	MobiDBLite	consensus disorder prediction	36	69	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso11g0720	229	275	C2H2 Transcription Factor Family	AT4G35280	44.681	1.50e-08	53.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso11g0720	-		-	gsj:114373909	597.43