Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0715 ATGGCTTGTCTGAGCCGCTACCACCACCACCACCACCCCCGCGGCGCCACCTGGCTCTCTTCCCCTGACGAAATGCTCCAACACTGCCCCCTCTCCGCCCACCACCGCCGTCTCCGCGATGACGACGCCGAACCTATCTACCTTCCCTCTCTCTCCTCCGCCTACCGCATCTTCCCCGTCTACGCCATGGGCGCCCCCGACCCGACACCAGAACCCGAATTAGACGGACCCGACCCGATTTGGAACGCTGTCAGGGACGAAGCCAAGCTCGAGGCGGAGAAGGAGCCGATTCTGAGTAGCTTCTTGTACGCTAGCATTTTGGCGCATGATTGCTTGGAGCAAGCATTGGCGTTTGTCGCCGCTAATCGTCTCCAAAACCCTACTCTCTTGGCCACTCAGCTTATGGATATCTTCTGCAATGTCATTTTGCATGACAAAGCTATCCAGCGATCCATTCGCCTTGATGTTCAGGCATTTAAAGATCGTGACCCTGCTTGTTTGTCGTATTGCTCCGCGCTTTTGTATATGAAGGGTTATCATGCTCTGCAAGTACATCGGGTAGCCCATGCATTATGGCACCAGGGGCGCAAAGTCTTGGCCCTAGCTTTGCAAAGTCGTGTTAGTGAGGTTTTTGGTGTGGACATTCATCCAGCTGCGAAAATTGGGGAGGGGATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTGTTGGAAACAGAGTTTCACTGATGCATGGTGTAACATTAGGAGGCACGGGGAAGGAAATAGGTGATCGCCATCCCAAAGTAGGTGAAGGGGCACTAATTGGAGCTAGTGCAACTATACTTGGAAATATAAAGATTGGTGAAGGTGCCATGATTGCTGCGGGTTCCCTGGTGTTAAAAGATGTCCCTCCTCACTGCATTGCGGCAGGAATACCAGCTAAAGTCATTAGTGGTCTACAGGAGCATGACCCATCTTTAACCATGAAGCATGTGTACATGCTATCCTTATATCTCGAATTTTGTTCTTGGGATTCTGCAGATGCTACTAAAGATTTTTTCACACATGTAGCTACTAACTTCAGAGATGAAAAGCCCAATGGAGCGCAGCATCCAGATAGAAATGAAGTGAACATTTGA 1134 0.5018 MACLSRYHHHHHPRGATWLSSPDEMLQHCPLSAHHRRLRDDDAEPIYLPSLSSAYRIFPVYAMGAPDPTPEPELDGPDPIWNAVRDEAKLEAEKEPILSSFLYASILAHDCLEQALAFVAANRLQNPTLLATQLMDIFCNVILHDKAIQRSIRLDVQAFKDRDPACLSYCSALLYMKGYHALQVHRVAHALWHQGRKVLALALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGTGKEIGDRHPKVGEGALIGASATILGNIKIGEGAMIAAGSLVLKDVPPHCIAAGIPAKVISGLQEHDPSLTMKHVYMLSLYLEFCSWDSADATKDFFTHVATNFRDEKPNGAQHPDRNEVNI* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0715 377 PANTHER SERINE ACETYLTRANSFERASE 18 360 - -
Gso11g0715 377 Pfam Serine acetyltransferase, N-terminal 80 183 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso11g0715 377 CDD LbH_SAT 211 311 IPR045304 -
Gso11g0715 377 Gene3D serine acetyltransferase, domain 1 66 213 IPR042122 -
Gso11g0715 377 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 273 301 IPR018357 GO:0016740
Gso11g0715 377 Gene3D Hexapeptide repeat proteins 214 336 - -
Gso11g0715 377 SMART SATase_N_2_a 80 184 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso11g0715 377 SUPERFAMILY Trimeric LpxA-like enzymes 79 329 IPR011004 -
Gso11g0715 377 TIGRFAM cysE: serine O-acetyltransferase 152 313 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gso11g0715 377 Pfam Bacterial transferase hexapeptide (six repeats) 264 297 IPR001451 -
Gso11g0715 377 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 18 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0715 Gso-Chr11 6360783 6365800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0715 58 366 Miscellaneous Gene Families AT2G17640 69.775 1.15e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0715 K00640 - gmx:100775449 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0715 11 6360783 6365800 Gso11g0715 11 6360783 6365800 ECH
Gso1g1369 1 50378225 50382140 Gso11g0715 11 6360783 6365800 GST
Gso11g0715 11 6360783 6365800 Gso2g0355 2 3882187 3886577 PCT
Gso11g0715 11 6360783 6365800 Gso16g0956 16 26501157 26504944 PCT