Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0698 ATGAAAGCAATGACAGCAACGACAACGTTTGATGTCTCTGCCGCTTGCTTCCGTGCCCCTCCTTCTTGTTCACCGAATCCATGCCACACCAGTTTTTCAGTTATAAACTCCCTGAATCCTCACAAGGGACGACGGATAAGCGTTGCTGTTCCACCTAAGTTTCCAAGCTTCCGGAGGGAAGCAGCTCTGCAGGGGAATTTGGAGGCTGTTAGAGTCCCAACTTCGGTGCCTGTGCGTGTAGCATACGAACTTCTTCTAGCTGGTCATCGATATTTGGATGTAAGGACTCCAGAAGAGTTCAATGCTGGACACGCTCCTGGCGCCATTAACATACCTTATATGTTCAGAGTTGGATCAGGGATGACTAAGAATAGCAACTTTATTAGACAGGTGTCTTCAAATTTTAGGAAAGAAGATGAAATTATTGTTGGGTGTGAGCTTGGTAAAAGATCTATGATGGCCGCAAGTGACTTGCTAGCTGCTGGGTTCACTGGACTCACAGACATGGCTGGTGGTTATGCTGCATGGACACAAAATGGACTTCCAACAGAACTATGA 558 0.4659 MKAMTATTTFDVSAACFRAPPSCSPNPCHTSFSVINSLNPHKGRRISVAVPPKFPSFRREAALQGNLEAVRVPTSVPVRVAYELLLAGHRYLDVRTPEEFNAGHAPGAINIPYMFRVGSGMTKNSNFIRQVSSNFRKEDEIIVGCELGKRSMMAASDLLAAGFTGLTDMAGGYAAWTQNGLPTEL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0698 185 Gene3D - 61 184 IPR036873 -
Gso11g0698 185 CDD RHOD 92 176 - -
Gso11g0698 185 Pfam Rhodanese-like domain 91 178 IPR001763 -
Gso11g0698 185 ProSiteProfiles Rhodanese domain profile. 85 185 IPR001763 -
Gso11g0698 185 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 71 183 IPR036873 -
Gso11g0698 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 184 - -
Gso11g0698 185 SMART rhod_4 75 182 IPR001763 -
Gso11g0698 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0698 Gso-Chr11 6225851 6228856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0698 75 182 Sulfurtransferasese or Rhodanese AT5G66170 46.364 4.73e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0698 - - gmx:100499831 375.17