Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0657 ATGGCGGTTGCTGTAGCCATGTTACCTCGTTGGTCGGTTTTTCTTCTTTTTCTGTTTGTCTTGTGTATCTCAGGAGCAAAGGTTGTCACCATTGATGTACGTGCAGCCAAGAGTCTCATCCAGACCGGTTCCATTTATCTTGATGTTAGGACGGTGGAGGAGTTCAAGAAAGGGCATGTGTATGCAGATAATGTCCTTAACATTCCATACATGTTGAATACACCCAAGGGCAAGGTAAAGAATGGAGACTTTCTGAAGGAGGTTTCATCAGCTTGCAACAAAGAAGATCATCTCGTTGTGGGTTGTCAAAGTGGGGTGAGATCTCTGTATGCAACTGCTGATCTTCTATCTGATGGTTTTAAGAATGCGAAAGACATGGGAGGAGGTTATGTGGATTGGGTTAAAAACAAGTTTCCAGTGAATATACCAGAGGCCAAAGAGGAGCTATAA 450 0.4333 MAVAVAMLPRWSVFLLFLFVLCISGAKVVTIDVRAAKSLIQTGSIYLDVRTVEEFKKGHVYADNVLNIPYMLNTPKGKVKNGDFLKEVSSACNKEDHLVVGCQSGVRSLYATADLLSDGFKNAKDMGGGYVDWVKNKFPVNIPEAKEEL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0657 149 ProSiteProfiles Rhodanese domain profile. 45 142 IPR001763 -
Gso11g0657 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 148 - -
Gso11g0657 149 SMART rhod_4 31 139 IPR001763 -
Gso11g0657 149 Pfam Rhodanese-like domain 36 135 IPR001763 -
Gso11g0657 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 140 IPR036873 -
Gso11g0657 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 148 IPR044684 GO:0003824
Gso11g0657 149 CDD RHOD 36 134 - -
Gso11g0657 149 Gene3D - 23 141 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0657 Gso-Chr11 5908204 5909851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0657 27 146 Sulfurtransferasese or Rhodanese AT5G66170 53.333 7.64e-48 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0657 - K15692 gmx:100803436 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0657 11 5908204 5909851 Gso11g0657 11 5908204 5909851 ECH
Gso1g1417 1 50798308 50800089 Gso11g0657 11 5908204 5909851 GST
Gso1g1382 1 50480012 50482452 Gso11g0657 11 5908204 5909851 GST
Gso11g0657 11 5908204 5909851 Gso2g0399 2 4245513 4247522 PCT
Gso11g0657 11 5908204 5909851 Gso16g1010 16 27811380 27813290 PCT
Gso2g0399 2 4245513 4247522 Gso11g0657 11 5908204 5909851 PCT
Gso16g1010 16 27811380 27813290 Gso11g0657 11 5908204 5909851 PCT