Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0652 ATGATTTCTTCCGTGTCCTTTCCAGCGTCTCTTCCCGCCGTTAACTTCTCCGGCAACGCCATGGCTTCGCCGTCGTGCCGCGTCAAATCCCGGCCAATAGTCGCCTTCGCCACCGCCACTGCCACCGCTGAAGCTCGCTCTTCCTGGACGGAGCAACCGAGACCTTCCTATCTGAACTCCTCTTGCTCTTCGCTTTACGATATCCTCGGCATCCCCGCTGGCGCCTCTAACCAAGAAATCAAGGCCGCGTACCGGCGACTAGCCAGAGTCTGCCACCCCGACGTGGCGGCCATCGACCGGAAAAATTCGTCCGCTGACGAATTCATGAAGATCCACGCCGCGTACTCTACTCTTTCTGATCCCGACAAGCGCGCTAACTACGATCGGAGCCTATTCCGGCGACAACGGCCGTTGTCGACGGCGGCGGTGTTCTCCGGTTACACGCGTCGGAACTGGGAAACGGATCAGTGCTGGTAG 477 0.5933 MISSVSFPASLPAVNFSGNAMASPSCRVKSRPIVAFATATATAEARSSWTEQPRPSYLNSSCSSLYDILGIPAGASNQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSTAAVFSGYTRRNWETDQCW* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0652 158 CDD DnaJ 66 120 IPR001623 -
Gso11g0652 158 PRINTS DnaJ domain signature 66 84 IPR001623 -
Gso11g0652 158 PRINTS DnaJ domain signature 84 99 IPR001623 -
Gso11g0652 158 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gso11g0652 158 PANTHER - 1 158 - -
Gso11g0652 158 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Gso11g0652 158 Gene3D DnaJ domain 55 150 IPR036869 -
Gso11g0652 158 SUPERFAMILY Chaperone J-domain 61 134 IPR036869 -
Gso11g0652 158 ProSiteProfiles dnaJ domain profile. 64 131 IPR001623 -
Gso11g0652 158 Pfam DnaJ domain 65 128 IPR001623 -
Gso11g0652 158 SMART dnaj_3 63 123 IPR001623 -
Gso11g0652 158 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0652 Gso-Chr11 5849617 5850762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0652 66 128 C2H2 Transcription Factor Family AT1G74250 41.791 5.75e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0652 - - gmx:100800959 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0652 11 5849617 5850762 Gso11g0652 11 5849617 5850762 ECH