Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0644 ATGGCCATCAAAAAATCCAATAAACTACCACAAGCTATTGTTCTCAAGCAAATTGTCAAGAGATGCTCAAGTTTTGGCAAGAAGCAGACCTACAATGAAGAGGGTCTTCCTGATGATGTGCCAAAAGGCCATTTTGCGGTCTATGTTGGAGAGAACAGGACCAGATATATTATCCCAATTTCATGGCTGGCTCACCCTCAGTTTCAAATTTTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAACCACGACATGGGACTTACCATACCATGCGATGAAGTTGCATTTGAGTCATTAACTTCCATGATGAGATGA 315 0.4254 MAIKKSNKLPQAIVLKQIVKRCSSFGKKQTYNEEGLPDDVPKGHFAVYVGENRTRYIIPISWLAHPQFQILLQRAEEEFGFNHDMGLTIPCDEVAFESLTSMMR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0644 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Gso11g0644 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Gso11g0644 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0644 Gso-Chr11 5741534 5742412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0644 1 99 Calmodulin-binding Proteins AT3G43120 39.604 1.03e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0644 K14488 - gmx:100798840 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0644 11 5741534 5742412 Gso11g0644 11 5741534 5742412 ECH
Gso4g0223 4 2019740 2020519 Gso11g0644 11 5741534 5742412 ECH