Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0626 ATGGATTGGCAAAGCATGATGGGCAACCTGGACCCATTCCAAAGAACAATCTTAATCCTCGTCCCACTAACACTACTCCTGCTGCTGTTACTATCTCGTACCCGTCCAAGACCGCCCTATCCACCAGGCCCTAAGGGCTTCCCAATCATAGGAAACATGTTTATGATGGACCAGCTAACCCACCGCGGTCTCGCCAACCTGGCCAAACACTACGGCGGAATCTTCCACCTTCGCATGGGCTTCCTCCACATGGTCGCCATCTCCGACCCCGATGCCGCGCGACAGGTTCTCCAAGTCCAAGACAACATCTTTTCCAACCGCCCCGCCACCATCGCCATCAGCTACCTCACCTACGACCGCGCCGACATGGCCTTCGCCCACTACGGCCCCTTCTGGCGCCAGATGAGGAAACTCTGCGTCATGAAGCTCTTCAGCCGCAAGCGCGCCGAGTCCTGGCAGTCCGTTCGCGACGAGGTCGACTCCGCCGTCCGCGCCGTCGCCAACAGCGTCGGAAAACCCGTCAACATCGGAGAATTAGTGTTTAACCTCACCAAGAACATCATCTACCGCGCCGCGTTCGGGTCGAGTTCGCAGGAAGGTCAAGACGATTTCATTAAAATATTGCAGGAGTTCTCTAAGCTCTTTGGCGCGTTTAATATTGCGGATTTTATACCCTACCTCGGGCGCGTAGATCCACAAGGTTTGAACTCCAGACTCGCTAGGGCACGTGGCGCGCTCGATAGCTTCATTGATAAGATCATCGACGAGCACGTGCAGAAGAAGAATAATTATCAGAGCAGTGAAATTGGTGATGGTGAAACGGACATGGTGGATGAGTTGCTGGCGTTCTACGGCGAGGAGGCGAAGTTGAACAATGAATCGGACGATAATTTGCAGAACTCTATCAGACTCACTAAGGATAACATCAAGGCTATCATTATGGACGTGATGTTCGGAGGCACGGAAACGGTGGCGTCAGCAATCGAGTGGGTCATGTCGGAGCTGATGAGAAGCCCAGAAGACCAAAAGCGGGTCCAACAAGAGCTGGCGGATGTAGTGGGCCTGGACCGTCGGGTCGAAGAGTCCGATTTCGAGAAACTCACTTATCTCAAATGTGCCCTCAAAGAGACCCTCCGCCTCCACCCTCCGATACCGCTCCTCCTCCACGAGACGGCGGAGGACGCCACCGTCGGCGGCTACTTCGTCCCCAGGAAGGCGCGTGTTATGATCAACGCGTGGGCCATTGGGAGGGACAAGAATTCCTGGGAGGAACCCGAAACTTTTAAGCCCGCCCGGTTCCTTAAACCGGGCGTGCCCGATTTCAAGGGGAGCAACTTCGAGTTCATTCCATTCGGGTCGGGTCGAAGATCCTGCCCCGGAATGGTGTTGGGGCTCTACGCGCTTGAATTGGCGGTGGCTCATCTTCTTCACTGCTTCACGTGGGAATTGCCAGATGGAATGAAACCAAGTGAGATGGACATGGGTGACGTGTTCGGACTCACCGCTCCAAGGTCCACGCGACTCATTGCTGTACCAACCAAGCGCGTGGTGTGCCCTCTCTTTTAA 1566 0.5504 MDWQSMMGNLDPFQRTILILVPLTLLLLLLLSRTRPRPPYPPGPKGFPIIGNMFMMDQLTHRGLANLAKHYGGIFHLRMGFLHMVAISDPDAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDSAVRAVANSVGKPVNIGELVFNLTKNIIYRAAFGSSSQEGQDDFIKILQEFSKLFGAFNIADFIPYLGRVDPQGLNSRLARARGALDSFIDKIIDEHVQKKNNYQSSEIGDGETDMVDELLAFYGEEAKLNNESDDNLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWVMSELMRSPEDQKRVQQELADVVGLDRRVEESDFEKLTYLKCALKETLRLHPPIPLLLHETAEDATVGGYFVPRKARVMINAWAIGRDKNSWEEPETFKPARFLKPGVPDFKGSNFEFIPFGSGRRSCPGMVLGLYALELAVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPRSTRLIAVPTKRVVCPLF* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0626 521 PANTHER CYTOCHROME P450 84A1-RELATED 1 521 - -
Gso11g0626 521 Gene3D Cytochrome P450 34 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 SUPERFAMILY Cytochrome P450 41 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 1 521 - -
Gso11g0626 521 Pfam Cytochrome P450 41 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Gso11g0626 521 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0626 521 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0626 Gso-Chr11 5576659 5579876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0626 47 520 Monolignol Biosynthesis Gene Families AT4G36220 76.632 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0626 K09755 - gmx:100793538 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0626 11 5576659 5579876 Gso11g0626 11 5576659 5579876 ECH
Gso11g0626 11 5576659 5579876 Gso16g1059 16 28793206 28798485 PCT