Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0619 ATGGAATGGATCATAGGTGTTTGTGTTTCGATGGGCATGTTGTTCTTGATGAGTTGGTGGATTCTTCTATGTGGCAAGAATGATGATGAGAAAACAGTGGCAAAGGGCAAAGTTCCAAAAGGGAACTCCGGTTGGCCTTTACTCGGAGAGACCCTTGATTTCATTGCTTCTGGATACACCTCAACCCCTGTCAGCTTCTTGGAAAAGCGCAAGTCTTTGTACGGGAATGTGTTTAAGACATGCATTTTGGGAAGCAATGTGATAGTTTCCACTGACCCGGACGTGAACAAGGTGGTTCTGCAGAACCAAGCCAATAACTTCGTCCCCGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACAATCCATACTCAAAATGAACGGGACCATGCATAAGAAAGTGCATACACTCATCGCAGGGTTCCTACGATCCCCACAACTAAAAGCTCGAATTACCAGAGACATTGAACACACTGTTAAACAATGCTTCGCTTCTTGGACGCCCCACCAACCAATCTATGTTCAAGATCAAGTCAAAAAGATTACATTTCCTGTTTTGATCAAAGTTCTGATGAGCGTTGGTCCTGGTGAAGATTTGGACTTCCTGTATAGAGAATTTGCAGAATTCATCAAAGGGTTGATTTGCTTACCCCTCAAATTTCCAGGAACAAGACTATATAAATCCTTGAAGGCTAAAGATAGGATGGTGAAGATGGTGAGGAATATAGTAGAGGAGAGGAAGAAGCTACAGAAGGATAATAATGCAGATGATCATGGTGATACAGTAGCAGTAGCAGTGAATGATGTGGTGGACGTACTATTAAGGGATAAGGTTGACTCGAACTCTAGCTCACGTTTGACTCCAGAAATGATTAGCCAAAACATAATAGAGATGATGGTACCAGGGGAGGAGACTCTTCCTACGGCTATGACCATTGCCCTCAAGTTCCTCAGTGACTCCCCTCTCGCTCTATCCAAACTTCAGGAGGAGAACATGGAATTGAAGAGGCTGAAGACTAATTGCTCAGATGATTATGCATGGACTGATTACATGTCACTGCCATTTACTCAAAACGTTATCAGTGAAACTCTCAGAATGGCCAATATTGTCAATGGCATTTGGAGGAAATCGGTCAATGACATAGAAATTAAAGGGTACCTAATTCCGAAACACTGGTGTGTTATGGCATCTCTTACCTCTGTTCACATGGATGGGAAGAACTATGAAAACCCTTTTAAATTTGATCCTTGGAGATGGGAGAAAATTGGAGTTGTGGCCGGTAACAACTGCTTTACCCCATTTGGTGGTGGACATAGACTATGCCCTGGATTAGAACTCTCCAGGCTAGAGCTATCTATTTTCCTTCACCATCTTGTTACTACGTACAGATGGGTCGCTGAGAGGGATGAAATCATCTACTTTCCAACTGTTAAGATGAAGAGGAAGCTCCCAATTAGTGTGCAACCCATTAACGCATGA 1482 0.4271 MEWIIGVCVSMGMLFLMSWWILLCGKNDDEKTVAKGKVPKGNSGWPLLGETLDFIASGYTSTPVSFLEKRKSLYGNVFKTCILGSNVIVSTDPDVNKVVLQNQANNFVPAYPKSIRELMGEQSILKMNGTMHKKVHTLIAGFLRSPQLKARITRDIEHTVKQCFASWTPHQPIYVQDQVKKITFPVLIKVLMSVGPGEDLDFLYREFAEFIKGLICLPLKFPGTRLYKSLKAKDRMVKMVRNIVEERKKLQKDNNADDHGDTVAVAVNDVVDVLLRDKVDSNSSSRLTPEMISQNIIEMMVPGEETLPTAMTIALKFLSDSPLALSKLQEENMELKRLKTNCSDDYAWTDYMSLPFTQNVISETLRMANIVNGIWRKSVNDIEIKGYLIPKHWCVMASLTSVHMDGKNYENPFKFDPWRWEKIGVVAGNNCFTPFGGGHRLCPGLELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKRKLPISVQPINA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0619 493 PRINTS P450 superfamily signature 144 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 10 488 - -
Gso11g0619 493 Coils Coil 325 345 - -
Gso11g0619 493 Gene3D Cytochrome P450 27 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 Pfam Cytochrome P450 39 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 SUPERFAMILY Cytochrome P450 36 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 PANTHER CYTOCHROME P450 26 10 488 - -
Gso11g0619 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Gso11g0619 493 PRINTS E-class P450 group IV signature 65 88 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 PRINTS E-class P450 group IV signature 354 370 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 PRINTS E-class P450 group IV signature 403 421 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 PRINTS E-class P450 group IV signature 426 442 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0619 493 PRINTS E-class P450 group IV signature 442 460 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0619 Gso-Chr11 5512375 5518690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0619 37 464 Cytochrome P450 AT3G13730 51.402 3.78e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0619 K12637 - gmx:100799030 988.793