Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0614 ATGATGCCTCAACGAGCTAATCTTCACATAGCCTTAACATTTTTACAATTTTGTTATGCAGGAAATCATATATTTCTGAGAATTGCACTTGATACAGGCGTAAGCAAGCTTATTTTTCCTGTCCATAGAAACATCACCGCCTTGGTTCTTCTGGGTCCCCTCGCATATTTTTCAGAGAAGAAAGACAGGCCATCAATAACCAGATACTGTGTGCTACACTTTTTCCTACTTGGACTTGTTGGAATAACAATGAAAGAAGGATTCTACCTCTTGGGTTTGGAGAAAACATCACCTACTTTTGCTGCTGCTATGCAGAATTCTGTTCCAGCACTTACCTTTCTGATGGCTGCTCTACTCAGATATGAGAGTGTGCACTTCAACAGGATTGATGGTCTGGCTAAGGTCCTTGGAGTCCTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAGGGACCTGTTATTTATACTCCGCGTTTAGCATTACATCAGGAACAATACTTGTCTGTATTGGGGGATGCCACAGGAAAGAACTGGAACTTGGGTGGCATCTATCTCTTTGGTCACTCCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAAATACTCAGCCCCACTCACAGTTTCTGCTTTTACATGCTTCTTTGGTGTTGTGCAGTTTTTGACAATTGCAGCCTTTTTTGAGACGGATTCCAAAGCCTGGCAGTTCAATTCTAGTGGAGAGATCTTCAGTGCCTTGTTCTCGGGACTGGTGACTTCAGGGCTGGCATCAGCAATACAGATATGGACTATTGGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTACCTTTACAAACATTACTTGTATCTGTGATGGCATCTTTTATTTTCGGTGAAGAATTCTTCTTGGGAGGCATTATTGGAGCATTCTTAATTATATCCGGCTTGTACCTTGTTGTCTGGGGAAGAAGTCAAGAAACCAAGTATGCCAAAGAGGTCATAGTCCCCATTGAGCCCAAGAATCATTGGGAAGAAAAAAGTGACAGTTCTTTCCTCATCCAACGATTGATTACTACACAAAGCTCTTAG 1089 0.4206 MMPQRANLHIALTFLQFCYAGNHIFLRIALDTGVSKLIFPVHRNITALVLLGPLAYFSEKKDRPSITRYCVLHFFLLGLVGITMKEGFYLLGLEKTSPTFAAAMQNSVPALTFLMAALLRYESVHFNRIDGLAKVLGVLASVGGASIITLYKGPVIYTPRLALHQEQYLSVLGDATGKNWNLGGIYLFGHSLCWSGWIVMQAFVLKKYSAPLTVSAFTCFFGVVQFLTIAAFFETDSKAWQFNSSGEIFSALFSGLVTSGLASAIQIWTIGKGGPVLASIYLPLQTLLVSVMASFIFGEEFFLGGIIGAFLIISGLYLVVWGRSQETKYAKEVIVPIEPKNHWEEKSDSSFLIQRLITTQSS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0614 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 324 - -
Gso11g0614 362 PANTHER WAT1-RELATED PROTEIN 5 332 IPR030184 GO:0016021|GO:0022857
Gso11g0614 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 137 - -
Gso11g0614 362 PANTHER WAT1-RELATED PROTEIN 5 332 - -
Gso11g0614 362 Pfam EamA-like transporter family 16 144 IPR000620 GO:0016020|GO:0016021
Gso11g0614 362 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0614 Gso-Chr11 5479702 5482185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0614 2 330 Nodulin-like Gene Family AT1G75500 59.403 7.69e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0614 - - gmx:100790386 696.812