Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0604 ATGTTTTCCACAAGAGACATGCCTTCCCCATCCTCAATTTTCTCAGCCTACGCCTCCATGACAGCTTCCATCATGCTTCTGCGTTCCATGGCCAACGAACTCGTTCCCCAACCCATTCGCGGCTACCTTTACAACACGTTCGGTTACCTCATAAGGCCTCGTTCCCAAACCCTCACCCTCATCATCGAAGAGTCCACCGGCATAGCCCGTAACCAAGTCTACGACTCCGCGGAGGCCTACCTCTCCACACGTGTCAGCCCCGAAAACGAGAGACTCAAGATCAGCAAGAGCGCAAAAGAGAAGAAACTAACCGTTCGGTTGGAGAAGGGCGAGAAGGTAGTCGACTGCTTCAACGGCGCGTGCTTCAAATGGAGATTCATCTGCGCTGAGTCCGAGAAGAACAACCCCAACGATCATAGCAACAACAGCATCTCCGTACGGTCCGAAAAACGGTCTTTTGAGCTGAGCTTCCCGAAGAAGTACAAGGAAATGGTTTTGGACTCTTACCTGCCCTTCATTCTCGACAAGGCCAGGGAGATGAAGGACGAGGAAAGGGTCTTAAAGATGCACACTCTCAACACCTCCTACTGTTACAGTGGAGTCAAATGGGACTCCATTAATCTGGAGCATCCCTCAACTTTTGAGACGCTGGCGATGGAGCCGGAGCTGAAGAATGCGGTGATAGAGGACTTGGATAGGTTCGTGAAGAGGAAGGAGTTTTATAAGAGGGTTGGGAGGGCGTGGAAACGTGGCTACTTGCTGTATGGGCCTCCTGGTACTGGAAAATCTAGCTTGATCGCTGCTATGGCGAATTACTTGAAGTTTGACGTCTTTGACCTCGAACTTGGGAGCATAGTGAGAGATTCTGACCTCAGGAAGCTGCTTCTGGCGACTGCGAATAGGTCCATTTTGGTCATTGAAGACATTGATTGCAGTGTGGATCTGCCAGAGCGTCGGCATGGGGATCATGGACGTAAACAAGCTGACGTGCAGGCTCACCGTGCATCTGATGGACGGATGCAGTTGACCTTGTCTGGATTACTGAACTTCATAGATGGGCTATGGTCTAGTTGTGGAGACGAGAGAATCATCATATTCACCACCAACCACAAGGAGAGGCTAGACCCAGCACTGTTGAGGCCAGGAAGAATGGACATGCACATTCACATGTCCTATTGCTCCTACCAAGGCTTCAAGATTTTGGCCTCAAACTACTTAGAAACTTCCTCTGACCACCCCCTCTTTGGAGAGGTAGAGGGGCTAATAGAGGACATACAGATAACCCCTGCGCAAGTGGCAGAGGAACTGATGAAGAACGAAGACCCTGAGGCCACACTTGAAGGATTCGTGAAGCTACTTAAGAGGAAGAAGATGGAAGGTGATGTGTGTGAAAACTCTACTCCTGATAAAGCAGAACCTACTCGTCAGCAATCTAAAAGGCGCAAGGTTGGTTGCAAGCAAAAACGAGGCAAGAGTAATAGTGGTGTACATGTCACCCAAATAAGGACAAGAAGAATGAGAGGGTGTAGTTTGTAA 1536 0.4954 MFSTRDMPSPSSIFSAYASMTASIMLLRSMANELVPQPIRGYLYNTFGYLIRPRSQTLTLIIEESTGIARNQVYDSAEAYLSTRVSPENERLKISKSAKEKKLTVRLEKGEKVVDCFNGACFKWRFICAESEKNNPNDHSNNSISVRSEKRSFELSFPKKYKEMVLDSYLPFILDKAREMKDEERVLKMHTLNTSYCYSGVKWDSINLEHPSTFETLAMEPELKNAVIEDLDRFVKRKEFYKRVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELGSIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERRHGDHGRKQADVQAHRASDGRMQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYQGFKILASNYLETSSDHPLFGEVEGLIEDIQITPAQVAEELMKNEDPEATLEGFVKLLKRKKMEGDVCENSTPDKAEPTRQQSKRRKVGCKQKRGKSNSGVHVTQIRTRRMRGCSL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0604 511 CDD AAA 237 392 - -
Gso11g0604 511 Gene3D - 201 388 IPR027417 -
Gso11g0604 511 MobiDBLite consensus disorder prediction 461 479 - -
Gso11g0604 511 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
Gso11g0604 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 440 IPR027417 -
Gso11g0604 511 Pfam ATPase family associated with various cellular activities (AAA) 253 391 IPR003959 GO:0005524|GO:0016887
Gso11g0604 511 MobiDBLite consensus disorder prediction 461 497 - -
Gso11g0604 511 ProSitePatterns AAA-protein family signature. 362 380 IPR003960 GO:0005524|GO:0016887
Gso11g0604 511 Gene3D - 389 460 - -
Gso11g0604 511 PANTHER BCS1 AAA-TYPE ATPASE 6 474 - -
Gso11g0604 511 SMART AAA_5 248 394 IPR003593 -
Gso11g0604 511 PANTHER BNAA10G17020D PROTEIN 6 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0604 Gso-Chr11 5380866 5384892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0604 226 394 Calmodulin-binding Proteins AT3G56690 28.249 4.92e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0604 - - gmx:100785070 996.112