Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0596 ATGGATCAGTCACCACCTTATTATAACCGATTTCCTCAGACTCCAAGCTCATCCAAGAAGGGAAGAAGTGGTTATGAACCATCAGACACAGAGACAGAGTGGCAAGAGATTCCACGGCACGAACGAGAAAGAAGAAACTTCACTTTAGAAGAAACAAAAGCATTTACACTAATGAACAAAAGCCCCATGGCACTACACAGGAGACACCCTTCAAGGTTTGAACATGAAGTCTCATCAGCTTCAACAGCTTCACGAAGAAGACACCATAGTAAATCACCCTATAAGCTGCGCGTAGCAGAAGAAGATGTTACTGTTGCTGCATCATCATCACCCATAACAGGTTTGAATACAAAGAGAAATATCAGTCCCTTGCCGAGACCTGACCTTGGAAGAACCGTGTCTCCTTTCAGGGAGCAAAGAATTGAGAAGCCACACTACAAGAGATCAGTGACAGCTCCAAGATTGAGGATTCAAGAGAGCAACAACGGAGGGAGAACCATTAATGAAATGGTTCATAAACAAAGAGAAGCTTCTCCTTTCGAAGCGCCTTCGGTTGGCATAATCAACGAGATGATAGCACAGGTGAAGCTATCTAAAGATCCCACTAGTGATTATTCATCAGTGCTCGAAAGCACTGATTCCATTCATCCGGGTGACCTTTTCTTTTCTCGCGAATGCAACGCCTTGCAAGCGAAGAATTCTTCGTTGCCAAGACGCATCCAGCAGTGTGAGTATTTCAGTCCAAGACCACCGGTGAACACCACCAGAATCCCATCTGAAAGCAAAGGAAATAATGGTGACATTAACATGAAAATGAATATCTTGTCTCGATCAAACACGGGTTTAAGTTCTGCGGCTACGAGTAGAAAGGGCAGTGACACTGGGAAGCCAAGTAGTGTAACAAGCGAAGCTAGTGGAAAGACAACTGCAAGCATGAAGAAATTCACAGCCAATAGAAAAAAGAATCAGAAAGATACATGGTTTTCTTGCATGAAAACAGGTAACTGTAGAACCACAAAAAAATCGCCCGAACGTCGACCTATTGATGAATCTTCTTTCATAGAGAAGGCAGTTGTAGTGGAAAGCCTCCCACAATTCTGGGCAGATAAACACCAACCTGCTTCACTTAATGGCTTCATTTGCAATAAACATGAAGCTCAACTTCTCAAGGAATTGGTGTCTCAGGGCTCTTGTCCTCATATTTTGCTTCTAGGACCCTCTGGCTCCGGGAAAAGAGAACTAGCAATGGCTATTCTTCGAGAAATATATGGGGATGCATGTTGTAACCTGTCTCATGATTTAAGACATTTTCCTATTCAGGACCAAAGGCTTAAGAAAGTATCTGTTCCAATAACATCCAGTTCTCATCACATGGAGCTAGATGTAAATTCAGAACCAAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAGCAATATATATGCGATTGCCCCTGAAGTCAGCAATATTAATTTCAAGTCAGATTTTAAAGTTATAGTTCTTTATGACGTCCACAAAGCAGTAGATAACATCCAGCACATTATCAAATGGATCATAGACCGCTATTCTGATATATGCAAATTAGTCCTCTGCTGTGAAGATGATGCAGACCTTATTGAACCTGTGAAAAACCGATTCAAAGTTATCCAAGTTGATGCTCCTCAGAATCACGAAATTATTGAGGTTCTTATTCAGATAGCAAAGAATGAGGAAATTGATCTATCCGTGAATTTTGCTGCAAAAATTGCTACAAAATCTAAGCAGAACCTCAGAAAAGCAATCATGGCTCTTGAAGCATGCAATGCACACAACTATCCTTTTTCAGAAGAACAACCAATTCCGGTTGGATGGGAGGAGATTGTAATAGAAGTTGCTGCAGAGATCCTAGCTGATCCATCATTTTCACGCTTACTCTCAATACGAGGGAAATTTCAAATGCTTCTGTTGGATTTTGTCCACCCGAAATTGATTCTCCAGAAACTCGTGGAACATCTCCTAAAAAGAATTGAGGCCAGCTTAAGAAGGGAGCTTTACTACTGGCATGCTTATTATGACAGAAGACTCCCACCAGGAATAACAGCTTTACTAAAGTTAGAAGAATTCGTGGCCAAGTTCATGAGCATGTGCAGAAAAAACTCTGGCAGTCGGAAATATGTGTAG 2166 0.4123 MDQSPPYYNRFPQTPSSSKKGRSGYEPSDTETEWQEIPRHERERRNFTLEETKAFTLMNKSPMALHRRHPSRFEHEVSSASTASRRRHHSKSPYKLRVAEEDVTVAASSSPITGLNTKRNISPLPRPDLGRTVSPFREQRIEKPHYKRSVTAPRLRIQESNNGGRTINEMVHKQREASPFEAPSVGIINEMIAQVKLSKDPTSDYSSVLESTDSIHPGDLFFSRECNALQAKNSSLPRRIQQCEYFSPRPPVNTTRIPSESKGNNGDINMKMNILSRSNTGLSSAATSRKGSDTGKPSSVTSEASGKTTASMKKFTANRKKNQKDTWFSCMKTGNCRTTKKSPERRPIDESSFIEKAVVVESLPQFWADKHQPASLNGFICNKHEAQLLKELVSQGSCPHILLLGPSGSGKRELAMAILREIYGDACCNLSHDLRHFPIQDQRLKKVSVPITSSSHHMELDVNSEPNAKYALMGLIKEISNIYAIAPEVSNINFKSDFKVIVLYDVHKAVDNIQHIIKWIIDRYSDICKLVLCCEDDADLIEPVKNRFKVIQVDAPQNHEIIEVLIQIAKNEEIDLSVNFAAKIATKSKQNLRKAIMALEACNAHNYPFSEEQPIPVGWEEIVIEVAAEILADPSFSRLLSIRGKFQMLLLDFVHPKLILQKLVEHLLKRIEASLRRELYYWHAYYDRRLPPGITALLKLEEFVAKFMSMCRKNSGSRKYV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0596 721 MobiDBLite consensus disorder prediction 110 132 - -
Gso11g0596 721 Gene3D - 557 615 - -
Gso11g0596 721 MobiDBLite consensus disorder prediction 66 93 - -
Gso11g0596 721 MobiDBLite consensus disorder prediction 67 83 - -
Gso11g0596 721 MobiDBLite consensus disorder prediction 1 48 - -
Gso11g0596 721 MobiDBLite consensus disorder prediction 24 48 - -
Gso11g0596 721 MobiDBLite consensus disorder prediction 1 23 - -
Gso11g0596 721 Gene3D - 365 556 IPR027417 -
Gso11g0596 721 Gene3D - 618 711 - -
Gso11g0596 721 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 175 720 - -
Gso11g0596 721 PANTHER OS02G0704966 PROTEIN 175 720 - -
Gso11g0596 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 604 IPR027417 -
Gso11g0596 721 CDD AAA 382 422 - -
Gso11g0596 721 SUPERFAMILY post-AAA+ oligomerization domain-like 618 710 IPR008921 GO:0003677|GO:0006260
Gso11g0596 721 MobiDBLite consensus disorder prediction 246 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0596 Gso-Chr11 5324059 5328449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0596 366 710 Core DNA Replication Machinery Family AT5G27740 37.644 3.78e-76 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0596 K10756 - gmx:100795321 1434.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0596 11 5324059 5328449 Gso11g0596 11 5324059 5328449 ECH